Gene YPK_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3412 
Symbol 
ID6090811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3745360 
End bp3746124 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content44% 
IMG OID641598496 
Productarogenate dehydratase 
Protein accessionYP_001722132 
Protein GI170025627 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.40472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TATCTTTGGG AATAATGGTA TTGGCATTAA TCAGTAGCCA ACACGTATTA 
GCAAAAAATT GGCAGGAAAT TAAGCAAAGT GGTGAGCTGC GTATTGGGGT ACCAGGTGAC
TATGCGCCTT TAGCTTTCCA TGATAAACAG GGCCAATTGA TCGGCTACGA TGTTGATATG
GCAAACGCCT TGGGTGCCAA CCTGAAACTG AAGGTTAATT TTGTTTCGAC CAGTTGGCCA
ACTCTTTCAG ACGATTTGGC GGCAGATAAA TTTGATATTG CCATGGGGGG CGTCACGGCG
ACACCCGGTA GAGAAGCGCA ATTTGCTTTA TCCCACGCCG TCGTGAAAAA TGGGAAAATT
GCGCTGACCC ATTGCCAGAA AGTCAATAAA TTCCCCACGC TTGATGCGAT TGATCGTCAA
AACGTCAAAG TTATTGTCAA CCCTGGCGGT ACCAACCAAT CGTTTGTTGA TGCAAATATT
AAGCAAGCGC AAATCATCCG AACCAAAGAT AACGTTGCTA ACCTGCAAGG TATACGTGAT
AAAAGTGCAG ATATTATGTT CACTGACTTA ATCGAAGGCG ATTATTATCA GAGCAAAGAA
CCTGGCGTAT TTTGTGTCGC CACCCCAGAG GTTTTAGCCG GAACGGGCAG CTACAAAGTT
TATATGATGG CTAAGGATAA TCAGCCGTTG TTAGAAGAAG TTAACCAGTG GCTGGCCGGG
AAGACCAAAA CCTTATTAGC ACAAAAGTGG AATATTTCTG AGTAG
 
Protein sequence
MKKLSLGIMV LALISSQHVL AKNWQEIKQS GELRIGVPGD YAPLAFHDKQ GQLIGYDVDM 
ANALGANLKL KVNFVSTSWP TLSDDLAADK FDIAMGGVTA TPGREAQFAL SHAVVKNGKI
ALTHCQKVNK FPTLDAIDRQ NVKVIVNPGG TNQSFVDANI KQAQIIRTKD NVANLQGIRD
KSADIMFTDL IEGDYYQSKE PGVFCVATPE VLAGTGSYKV YMMAKDNQPL LEEVNQWLAG
KTKTLLAQKW NISE