Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3412 |
Symbol | |
ID | 6090811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3745360 |
End bp | 3746124 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641598496 |
Product | arogenate dehydratase |
Protein accession | YP_001722132 |
Protein GI | 170025627 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.40472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATCTTTGGG AATAATGGTA TTGGCATTAA TCAGTAGCCA ACACGTATTA GCAAAAAATT GGCAGGAAAT TAAGCAAAGT GGTGAGCTGC GTATTGGGGT ACCAGGTGAC TATGCGCCTT TAGCTTTCCA TGATAAACAG GGCCAATTGA TCGGCTACGA TGTTGATATG GCAAACGCCT TGGGTGCCAA CCTGAAACTG AAGGTTAATT TTGTTTCGAC CAGTTGGCCA ACTCTTTCAG ACGATTTGGC GGCAGATAAA TTTGATATTG CCATGGGGGG CGTCACGGCG ACACCCGGTA GAGAAGCGCA ATTTGCTTTA TCCCACGCCG TCGTGAAAAA TGGGAAAATT GCGCTGACCC ATTGCCAGAA AGTCAATAAA TTCCCCACGC TTGATGCGAT TGATCGTCAA AACGTCAAAG TTATTGTCAA CCCTGGCGGT ACCAACCAAT CGTTTGTTGA TGCAAATATT AAGCAAGCGC AAATCATCCG AACCAAAGAT AACGTTGCTA ACCTGCAAGG TATACGTGAT AAAAGTGCAG ATATTATGTT CACTGACTTA ATCGAAGGCG ATTATTATCA GAGCAAAGAA CCTGGCGTAT TTTGTGTCGC CACCCCAGAG GTTTTAGCCG GAACGGGCAG CTACAAAGTT TATATGATGG CTAAGGATAA TCAGCCGTTG TTAGAAGAAG TTAACCAGTG GCTGGCCGGG AAGACCAAAA CCTTATTAGC ACAAAAGTGG AATATTTCTG AGTAG
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Protein sequence | MKKLSLGIMV LALISSQHVL AKNWQEIKQS GELRIGVPGD YAPLAFHDKQ GQLIGYDVDM ANALGANLKL KVNFVSTSWP TLSDDLAADK FDIAMGGVTA TPGREAQFAL SHAVVKNGKI ALTHCQKVNK FPTLDAIDRQ NVKVIVNPGG TNQSFVDANI KQAQIIRTKD NVANLQGIRD KSADIMFTDL IEGDYYQSKE PGVFCVATPE VLAGTGSYKV YMMAKDNQPL LEEVNQWLAG KTKTLLAQKW NISE
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