| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3401 |
|---|
| Symbol | |
|---|
| ID | 6089224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3732308 |
|---|
| End bp | 3733348 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641598485 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001722121 |
|---|
| Protein GI | 170025616 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ACCGTTTTCT ACCTATCGAC GGCACCATTT CCGGCTTGTT AGGGATTTTT
TGTCTGGCAA CACTGGCCTT CAGTCTGGCG ATGCCTGGCC GTTTCTTTAC CGAGAACACC
TTTCTGAGTA TTGCGTTTCA GTTGCCAGAG TTGGGGTTAC TGACCTTCGC CATGTTTGTA
CCGATGCTCA GCGGCGGATT AAACCTGTCG ATTATTGGCA CCGCAAACCT GACCAGTCTG
TTTATGGCCT GGCTGCTTAT CCAATATGTT CCCGCAGATG CCAGTACCAC GACACAACTG
ATGTGGCTAC TGCTGGCACT GATGGGGGCA GCGCTGATTG CCGTGGTTAT CGGCACACTG
ACCGGGTTGA TGATCGCCCG TATTGGCGCA CATCCCATTT TAGTGACGTT GGGCAGTATG
ACCATTATCA GCGGCATCGG TGTTTATCTG ACCAAAGGCG CGGCGCTCAG TGGCATGCCA
CCGATTGTTC GCAGTATGGG TTCCGAAGTG GTGATGGGCG TGCCGATCCC GATGATTATT
TTCATCGTGG CCTCACTGCT GCTGGCGCTG TTCTTAGGTA AAACTCGCCT GGGCAAAACG
ATTTATATGT GCGGCAGCAA TATTAACGCC ACGTGGTTCA GCGGTATTCG TACTGACCGG
GTCATGATGG CTATCTACAC CATGTCCAGT CTGCTGTGTG TACTGGCGGG CCTGATCATG
ATGTCGCGCT TCAACTCTGC GCGTATGGGC TACGGCGACT CTTATTTATT GCTTACCGTG
TTGGCTATCG TCTTGGGCGG AACCAACCCG TTCGGTGGTG TGGGTAAAGT GAGCCATGTG
TTCTGCGCTC TGCTGGTATT ACAAGTGATC GCCACGGGGC TGAGCCTACT CGGCGTTAGC
CTGCACGTTA ATCTGGCGGT CTGGGGTATC ACCCTGATCT TCGCCCTGGC CTTTAAGTTT
TTTAAAGAGA AATGGAAAGC CAAACGTGCC ATGAGGCAGA ACCGTTTGAA TTATCTAAAA
AATATTACCC CAAGTAATTA G
|
|---|
| Protein sequence | MKKNRFLPID GTISGLLGIF CLATLAFSLA MPGRFFTENT FLSIAFQLPE LGLLTFAMFV
PMLSGGLNLS IIGTANLTSL FMAWLLIQYV PADASTTTQL MWLLLALMGA ALIAVVIGTL
TGLMIARIGA HPILVTLGSM TIISGIGVYL TKGAALSGMP PIVRSMGSEV VMGVPIPMII
FIVASLLLAL FLGKTRLGKT IYMCGSNINA TWFSGIRTDR VMMAIYTMSS LLCVLAGLIM
MSRFNSARMG YGDSYLLLTV LAIVLGGTNP FGGVGKVSHV FCALLVLQVI ATGLSLLGVS
LHVNLAVWGI TLIFALAFKF FKEKWKAKRA MRQNRLNYLK NITPSN
|
|---|
| |