| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3299 |
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| Symbol | |
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| ID | 6089856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3612319 |
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| End bp | 3613398 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641598376 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001722021 |
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| Protein GI | 170025516 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.753835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCGG TGGCTGATCC GGTCATCACT CGGGAATTCA CAGTGGTTGG GGCGATTGTG
CGCAAGTATA TAACACGTTG TTTAATGTTG GTGATAGGGG GCCTGCTGCT GAGTGGCTGT
GGCCCTGAGC AGGTCAGCCT TGAAGGCAAA ACGATGGGAA CCTCCTATTC TATTAAGTAT
GTGAGTGATT CATCAACGGC TGCCCCAGAG ACGTTACAAC AGGAAATAGA CCTCATACTT
GAAGAGGTTA ATGACCAGAT GTCGACTTAT CGGCCACATT CTGAATTGAG CCGCTTTAAT
CAAAGCCGAG AGGTGAATCA ACCTTTCCCT GTATCGGCGG CGACGGCCAA AGTAGTACAA
GAGGCTATCC GTATTAACCG TCTGACCGAT GGTGCCTTAG ATGTGACTGT GGGGCCGTTA
GTCAATTTAT GGGGTTTTGG CCCTGAAGGG CGCCCGGATA CTGTACCTAC CGAGGATGAA
ATCACTCGGC GTCGTGCGTG GGTAGGGATT GATAAGCTGG CAGTGGATAA GAATGCATTA
ATAAAACGTG TTCCTGAACT GTATGTTGAT CTCTCTTCTA TCGCCAAAGG CTACGGCGTC
GATGTAGTAG CTGAATATCT GGAGGCGCAG AATATCAAGG ATTATATGGT TGATATCGGG
GGGGAAGTCC GTACCCGTGG TAACAATGGG GAAAATAAAC CTTGGCGTAT CGCCATTGAA
AAGCCAGTCG CGGGTTCTAC ACAACGTGCC CAGGAAATTA TTGAACCAGG GCGGATGGCG
GTAGCCACCT CTGGTGATTA TCGTAATTAT TTTGAGCAGG ACGGGATCCG TTATTCTCAT
ACTATTGATC CTGATACCGG GCGGCCTATT AACCACCGGT TAGTCTCTAT CACTGTTTTA
GACCCAAGCT GTATGACTGC TGATGGCCTC TCTACCGGGT TAGGTGTCCT TGGGCCAGAG
CGGGGAATGG CATTAGCCAA TTTATTGGGC ATCCCGGTCT TGATGATAAT CAAAACAGAT
GATGGGTTTG AAGAGCAGTA TTCAGATGCA TTTAAACCCT ATCTACAAGT AAAACATTAG
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| Protein sequence | MISVADPVIT REFTVVGAIV RKYITRCLML VIGGLLLSGC GPEQVSLEGK TMGTSYSIKY
VSDSSTAAPE TLQQEIDLIL EEVNDQMSTY RPHSELSRFN QSREVNQPFP VSAATAKVVQ
EAIRINRLTD GALDVTVGPL VNLWGFGPEG RPDTVPTEDE ITRRRAWVGI DKLAVDKNAL
IKRVPELYVD LSSIAKGYGV DVVAEYLEAQ NIKDYMVDIG GEVRTRGNNG ENKPWRIAIE
KPVAGSTQRA QEIIEPGRMA VATSGDYRNY FEQDGIRYSH TIDPDTGRPI NHRLVSITVL
DPSCMTADGL STGLGVLGPE RGMALANLLG IPVLMIIKTD DGFEEQYSDA FKPYLQVKH
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