Gene YPK_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3164 
Symbol 
ID6090954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3459335 
End bp3459754 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID641598243 
ProductMerR family transcriptional regulator 
Protein accessionYP_001721888 
Protein GI170025383 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA GCGATGTTGC GAAAAAAACC GGTTTAACCA GCAAAGCCAT TCGTTTTTAT 
GAAGAAAAAA AACTGGTGAC GCCACCTGTT CGCACGGATA ACGGTTATCG CAGCTACACG
GCCAAACATA TTGAAGAGCT CACGTTGCTG CGCCAGGCGC GGCAAGTGGG TTTTACACTG
GATGAGTGTC GTGAATTGCT GGCATTATTT CATAACCCAG CACGGCACAG CGCGGATGTG
AAAGCGGCAA CATTGCTAAA AGTAGCGGAA ATCGAGCAAC ATATTAATGA TTTGAATCAA
ATGCGTATGC GTTTGTTAGC GTTGGCAGAA GAGTGCCCAG GGGATGAGGG CGCAGATTGC
CCAATTATTA ATAGCCTGGC GGGATGTTGC CACTCAAGCA GTTCGCTACC ATTAAAATAA
 
Protein sequence
MNISDVAKKT GLTSKAIRFY EEKKLVTPPV RTDNGYRSYT AKHIEELTLL RQARQVGFTL 
DECRELLALF HNPARHSADV KAATLLKVAE IEQHINDLNQ MRMRLLALAE ECPGDEGADC
PIINSLAGCC HSSSSLPLK