| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3161 |
|---|
| Symbol | |
|---|
| ID | 6087428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3456725 |
|---|
| End bp | 3457594 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641598240 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001721885 |
|---|
| Protein GI | 170025380 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.324735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACAC CTACAACGAT TGAAATTACT GAAGCAAACC TGCACCAAGC CATAGAACAA
TCCATGTCAG TTCCTGTGTT GTTCTATTTT TGGTCTGAAC GCAGCCAGCA CTGCCTGCAA
TTGACACCAA CACTGGATAA ACTGGCCGCC GAGTATGCGG GTCAATTTAT TCTGGCCCGT
GTCGATTGCG ATGCACAACC CATGGTGGCG TCGCAATTTG GTTTACGCTC TATTCCGGCG
GTGTACCTGT TTAAAGATGG CCAGCCCGTT GATGGCTTCC AAGGGCCACA ACCAGAAGAG
GTGATCCGCG AACTGCTACA GCGGGTACTG CCAAAACCAG AAGAGCTAAA ATCGGCCGAA
GCGGCGCAAC TGATGAGTGA AGGCAAAGTC CCTGAAGCGC TGCCACTGCT GAAAGAAGCC
TGGCAACTCG CCCAACAAAG TAACAGCCCA CAAACTAGCG AAATCGCCCT GCAACTGGCA
GAAGCACAAA TTTTGCTGAA CCGCAGCGAA GATGCCGAAA GCGTATTGGC AACCCTTCCA
CTGCAAGATC GTGATACCCG TTATCAGGGG CTAATTGCCC AAATTGAGCT ACTGAAACAA
GCGGCTAATA CGCCAGAAAT CCAGCAACTA CAGCAACAAC TGGCAGAACA GCCGGATAAC
GTCGAGCTGG CCGTGCAATT GGCCTTACAA CTGCATCAGG TTGGCCGCAA CGAAGAAGCG
TTGGAACTGC TATTGGGTCA CCTGAAAAAA GATTTAGCCG CAGCGAACGG TACGGCACGT
AAAACATTAA TGGATATTTT AGCCGCATTA GGGACTGGCG ATGCACTGGC CGCTAAATAC
CGCCGCCAAC TCTACGCATT ATTGTACTGA
|
|---|
| Protein sequence | MLTPTTIEIT EANLHQAIEQ SMSVPVLFYF WSERSQHCLQ LTPTLDKLAA EYAGQFILAR
VDCDAQPMVA SQFGLRSIPA VYLFKDGQPV DGFQGPQPEE VIRELLQRVL PKPEELKSAE
AAQLMSEGKV PEALPLLKEA WQLAQQSNSP QTSEIALQLA EAQILLNRSE DAESVLATLP
LQDRDTRYQG LIAQIELLKQ AANTPEIQQL QQQLAEQPDN VELAVQLALQ LHQVGRNEEA
LELLLGHLKK DLAAANGTAR KTLMDILAAL GTGDALAAKY RRQLYALLY
|
|---|
| |