| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3145 |
|---|
| Symbol | |
|---|
| ID | 6089174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3437156 |
|---|
| End bp | 3439078 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641598223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001721869 |
|---|
| Protein GI | 170025364 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCTG TCCATATCTC TCCAGACGAC TTAGCAGAAC TGACGACGCT AGCCAGAGAT
CTGAACTTCG ACGATGCTGA ACGTCGTTCT GCCCTACTTG AAAACGGATC GCGTGATTTT
AATGCAGTAC CCGGTAGTGG GAAGACATCG CTTCTTGCTG CAAAACTTTT GTTGCTGGCT
AGGAAATGGC CTTATGCACG CCGAGGCATA TGTGTTCTAA GTCACACTAA CGTTGCTCGC
GATGAGATTG CACATCGCCT CGCGGGAACG GTTGAAGGAG CTCAACTTCT GAGCTACCCC
CATTTCATCG GCACTATCCA TAGCTTCGTC AATCATTTTT TTGCAATGCC CTTACTGCGT
AGCCTAGGAG AGAAGATTGA TGTCATTGAT GATCAGGTGT TCGCAGATAA AGCTCGTTCT
CTACTGCTGA CGAGAAAATT TTCAGGCCTT CGCATTTATC TGGAAAACCA GAGGAATGGT
GAAGGTATCG CCACTACGCT CTTCTATCGA ACGGCGGCGC TTAGCGTGCA TGTTGAAAGT
GGCAGCCTGC CCGCATCGCA CACAAAATCA TACAATTCAT TGATAGAACT GAAAAATATG
CTGGCGTGTC AGGGTATTTT TCGGCATCGT GACATGTTTG CATTTGCTGA CCTTGCGCTT
CAAACCTGCC CAAGGCTTCT TGATGTTGTC CATCGTCGCT TCCCGATGGT TTTCATCGAC
GAAATGCAGG ATACCTCCTG GGATCAAGAG TCCTTGTTAA ATCGTATTTT CGATGGACGG
TCAGTGATGC AGCGTTTTGG GGATATCGAT CAGAAGATTA TCTCTGATGA AGAACAAGCT
GAATTACTCA CATTCCCACG GGCTGGGTAT GGATGTATAA GCACCAGCAA ACGGTTCGGT
AAATCAATTT CCAATGCTGT AGGGTGTGTC CGTGTCAGTG GCGAGGCTGT TGTTGGTGAG
GCCGAAAATG TCCATGCCCC AGTCCTACTC TTGTACAAAA CGGATAGTGC AATCAAAGTG
GTCGAACGCT TTGGTCAAAT CGTTATTGAC CAATTGAGCG AAGACAACAT TGGTGTGCGA
GAGGTTAAGG CGATGAGCGC TCGCAAAACC GGTGAGAGCA ACGTTGACGC AGGTCGTCAT
CTTCTTGATT ACTGTCCAAC CTATGGAGGA GATAAGTTTA GTGCAGGACT ACGCTCCGAA
AGTTTCTGGA GTCTCATCGG TGACAGTAAA GGGGCTTTGA AAGAAACATC TTTGAGTTCA
AGAGTTTCTG ACGTTCGCAG AGCGTTATTG ATTATTCTGC GTGCATCTGG TGCATCGTGG
GCGCAAGACA TTCGTGATGC ACGAGCACTT CCACGAGCTG CAAAGGCTGT TACACCCACG
GGAACTATTG ATAAGTTAAC ACGGCAGCTC GCATTGTCCG GGGAGGCACT TTGTGCAGAT
GGTCAGCGAG ATGCACTGAC AGAACAGCTC TACATGCAAC TTAAGCCATA CCTTCCAGAA
GAGATAAGCC TTGAAATATT TAAGGGACTG AGCACTTTCG AAGACGCTGG CAGGAGGGGG
ATACTAAACA CTGCTTCCTC GGCGAAATGT GAAATTAGTT TTCAGGGGAG AAGCCTCGAC
ATTGGACTCG GTACGGTTGC AGGGATGAAA GGCGAAACTC ATGCCGCATC TTTAATCCTT
GAATCCTACG GTGGGTCCAG TCGTAAGTTC GATGTTGCAC TGGGGCTAGA GTATATTGCA
GGAACAGCGG CCAAAAAAAT TTCAAAGCTT CCTAAAACTC AACAGGCGCA AATGCGCAAC
CTTTACGTAG CAATGTCTCG ACCTGCGAAA TTGTTATGCC TTGCAGCGAA CGAAAGCCGA
GTTTCGCAGA CTTTGCGTGA TGCGCTTGTA GTTAAAGGAT GGCATATAGA AGAAGTGACT
TGA
|
|---|
| Protein sequence | MSAVHISPDD LAELTTLARD LNFDDAERRS ALLENGSRDF NAVPGSGKTS LLAAKLLLLA
RKWPYARRGI CVLSHTNVAR DEIAHRLAGT VEGAQLLSYP HFIGTIHSFV NHFFAMPLLR
SLGEKIDVID DQVFADKARS LLLTRKFSGL RIYLENQRNG EGIATTLFYR TAALSVHVES
GSLPASHTKS YNSLIELKNM LACQGIFRHR DMFAFADLAL QTCPRLLDVV HRRFPMVFID
EMQDTSWDQE SLLNRIFDGR SVMQRFGDID QKIISDEEQA ELLTFPRAGY GCISTSKRFG
KSISNAVGCV RVSGEAVVGE AENVHAPVLL LYKTDSAIKV VERFGQIVID QLSEDNIGVR
EVKAMSARKT GESNVDAGRH LLDYCPTYGG DKFSAGLRSE SFWSLIGDSK GALKETSLSS
RVSDVRRALL IILRASGASW AQDIRDARAL PRAAKAVTPT GTIDKLTRQL ALSGEALCAD
GQRDALTEQL YMQLKPYLPE EISLEIFKGL STFEDAGRRG ILNTASSAKC EISFQGRSLD
IGLGTVAGMK GETHAASLIL ESYGGSSRKF DVALGLEYIA GTAAKKISKL PKTQQAQMRN
LYVAMSRPAK LLCLAANESR VSQTLRDALV VKGWHIEEVT
|
|---|
| |