Gene YPK_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3133 
Symbol 
ID6091282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp3426097 
End bp3426567 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content52% 
IMG OID641598211 
ProductDNA repair protein RadC 
Protein accessionYP_001721857 
Protein GI170025352 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0278844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAC TTCATCTATC TCCGGTATTC CCTGAAAATG AGCAGCGCGT TATCCGGCGA 
GCCCTGCGCC TGCTGGAGAA ATATCAGCGC CAGCCGGGTG AACAGTTTAC TGCCACCAGC 
TTTGCTAAAA GCTGGGTGCA ATTACAGTTG GCTAGCCAAG AGCGGGAGGT CTTTCTCGTG 
ATGTACCTTG ATAACCAGCA TTGCCTGTTG GGGCACGAAG CGTTGTTTAC GGGTTCCATC 
AGCCATACAG AAGTACATCC CCGTGAGCTG GTGAAAGCGG CTCTGCGCCA CAACGCCGCT 
GCAGTGATTC TGGCGCATAA CCATCCGTCA GGTACGACAG AAATCAGCCA GCAGGACAAA 
CATATTACGC AGCGGATCGT AAAAGCGTTG GCGTTGGTCG AAGTGCGAGT GCTGGATCAT 
CTTGTAGTTG GGAATGAAGT GGTTTCTTTT GCTGAACAGG GTTTGCTTTA A
 
Protein sequence
MSALHLSPVF PENEQRVIRR ALRLLEKYQR QPGEQFTATS FAKSWVQLQL ASQEREVFLV 
MYLDNQHCLL GHEALFTGSI SHTEVHPREL VKAALRHNAA AVILAHNHPS GTTEISQQDK 
HITQRIVKAL ALVEVRVLDH LVVGNEVVSF AEQGLL