| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2958 |
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| Symbol | |
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| ID | 6088147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3257029 |
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| End bp | 3257457 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641598033 |
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| Product | colicin uptake protein TolR |
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| Protein accession | YP_001721685 |
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| Protein GI | 170025180 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0054 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCGAG TACGTGGTCG TAAGCGTCGC GAGCTTAAGT CTGAAATTAA TATTGTTCCC
TTACTCGACG TTTTGCTGGT GCTGTTGTTG ATATTCATGG CAACCGCACC CATTATCACG
CAAAGTGTCG AGGTAAACTT GCCAGATGCG ACGGATTCAA AAACGGTATC CAGTGATGAT
AATCCGCCTG TAATTGTTGA GGTTTCCGGT GTTGGGCAAT ATACAGTAGT CGTTGATCAC
CAACGGATGG AGCTGTTGCC TTCAGAGCAA GTGGTGGCAG AAGCTCAAGC ACGATTAAAA
ACGAATCCGA AAACCGTGTT CCTGATCGGT GGCGCAAAAG AGGTGCCTTA TGATGAAATT
ATTAAGGCGC TGAATATGCT GCATCAGGCG GGTGTTACAT CGGTGGGCTT AATGACCCAA
CCGATATAA
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| Protein sequence | MARVRGRKRR ELKSEINIVP LLDVLLVLLL IFMATAPIIT QSVEVNLPDA TDSKTVSSDD
NPPVIVEVSG VGQYTVVVDH QRMELLPSEQ VVAEAQARLK TNPKTVFLIG GAKEVPYDEI
IKALNMLHQA GVTSVGLMTQ PI
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