| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2615 |
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| Symbol | |
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| ID | 6087184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2869924 |
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| End bp | 2872968 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641597683 |
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| Product | cytotoxic necrotizing factor |
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| Protein accession | YP_001721345 |
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| Protein GI | 170024840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC AATGGCAACA TCAATATTTT TTATCCTATT CTGAGTTAGT TGCAAACTTT
CCGTCCCCAG AAAAAGTAGT AAGTGATTAT ATTAAACATA AGTTTAGTAC AACACTTCCA
TGGTTTGGCT GGGCAGACCC TGACAACCTT TATTTTATCC GATTTACTCA AAGCCGTAGT
AACAATAAAT CTTATACCGG ATGGGATCAT CTTGGTAAGT ATGCCATTGA AACGTTAACC
CTCACACAAG CAGCAATAGT TAATATTGGA AGTCGTTTTG ATATCTTTGA CGAAGCTAAT
TCAACTGCTG GAATATATAA AACAAACAAT GCTGATTCTT TTGACGAAAC AAACGAAGCA
AAAATGCTTC CTTCCGAATA CTTATATTTT TTGAGAGATT GTGATTTTTC TAATCTCTAC
AATAAAGCGC TATCAGATTA CTGGGCTGAG AATTACGAAA AATTTAGCAC ATTACTACAA
AACTATTATA TTTCATCAGC GTATTATCTA TATAAAGATA GTGCTATTAG TAAAGATGAA
TATGAATTCT CTATTGATGC TATTTTTAAT AAAAAAAATA AAATATTGCG TTATTACTTT
GATGTTTATG GGTATTATTC ATCTGATATG TTTGTTGCTA TGAATGATAA TAAAACAATG
CTTTTTATTC CGGGGGCAAC CAATCCCTTT ATCTTCGCAG ACAACATTAC AGATTTACGC
GACAAAATAA AGGCGTTAAT TTCTGATAAA AACACCCGTG AGTTATTTTC TAAGCATTTT
TCTTTATATG ACCGACAAGA TGGAAACACG TATTTAGGTG TTAATTCAAT GCTCGAACAG
ATTGTTAGTG GTGTGGTAGA TACTAATTAC ATAATGTATT CTAATAAAAA CATTCGTGAA
CGTAACGTAT TTGAATCAAT GGCGTTTTCT ACCCGAGAAA GAAGCTTTAA TGATGGTGAT
GTAATTATTA AATCAAACGC AGAAGTCCAG CGAGATTATG CCCTGAATGT TTTACAAACC
ATTTTATCTT TGAGCCCTAT ATTTGATATC GTGCTCCCGG AAGTTTCTAT TCCGATCAGC
CTTGGTATAA CCGCTTCAAG TGTCGGTATT AGTTTTGATG AGTTAATAAA CGGGGATACT
TATGAAGAGC GTCGCTCTGC AATTCCTGGA TTGGCAACAA ATGCTGTGTT ATTGGGTATA
TCATTCGCAA TACCATTTTT AATCAGTAAG GCAGAAGAAA ATAAGTTAAT TATCAATAAT
TTAGTAGGTA GTGACGAAAA CATACTTAAT AAAAATAATC TTGGTGATTT TTTGGAAAAG
TACAATATTA GCGAGAGTGA TATTCCAGAA AATGGCTCTT TAGTTATTAA TTTGAAAAAC
ACTAACGTAC CTGTTCGTCT TGTTAAACTG AATGATGAAG AGGGCGAAAT TGTTGCAATC
AAAGGAAGCA CATTGAGCGG GATTTACTAC GAAGTAGATA CTGAAACAGG TTATGAGATA
TTGTCACGCC GGGTATTTCG AACCGAATAT AATGAAAAAA TTTACTGGAC AAGGGGGGGA
GGACTGAAAG GTGGTCAGCC ATTTAACTTC GAGGGGCTTG ATATTCCTGT TTATTTTATA
GATAAACCAT ATTCTGAACT TGCATCTTCA GTGGAACTTT CATTTGTGAA TGATGATAGC
CCTTTGTTAT TCCCTGAAAT GGACTCCAGA TTACCAAAAC CGACTCCAGA GTTAGATATA
AAATACTACT CTTCTAATTT ATCTTCTTTT AAAGAAGATA CGGTAATTCT AATGAGAGGA
ACGACAGAAG AAGAAGCGTG GAATATTGCA AACTATAAAA CGGCAGGTGG GAGCAACAAA
GATCTTGAAG AGAACTTTAT TGAGGCTGGA CCACAGTTCA ACTTAAGTTT TTCTGAATAT
ACATCAAGCA TTAACAGTGC AGATACTGCA AGTAGAAAAC ATTTTCTTGT GATTATCAAA
GTACAGGTAA AATATATTAG CAATGATAAT GTTCTTTATG CTAATCACTG GGCCATTCCA
GATGAAGCAC CTGTAGAAGT TCTTGCAGTT GTGGACAGAC GGTTTATCTT CCCTGAACCA
CCAGTAAAAC CAAAATTATC ATTTATACAG AAAATTGCCA ATAGATTTCT CACAGAAAAC
GTAGCTGAAA TTTCCAGTAT AAATTTTCGA AGATTAAATT CTGGAAACAT TAATGTTCTA
AAAGGAAGAG GGGTTTTCTC ATCAAGACGG TTGCGAGAAA TTTATCTACG TTTTGATGCA
GCTAATGCTG ATGAATTACG TCCGGGAGAT GTTTATGTAA AAAAAACAAA GTTTGACAGT
ATGGGATATG ACTCTCATTT CTATAATGAG GGAATAGGCA TTAATGGTGC TCCAACACTT
AATACATATA CAGGGGAATA TGTCGCCGAC TCATCTTCTC AGGGAGCAAC ATACTGGCTC
AAGTATAATC TAACTAATGA AACAAGTATC ATTAAAGTAT CAAACTCTGC TCGTGGAGCA
AATGGTATAA AAATTGCGCT TGAGGAAATT GAGGAAAATA AACCTGTCGT AATTACCTCT
GGTACTTTAA CAGGGTGTAC AGTTGTTTTT GCACGAAAAG GCGAATACTT TTATGCTGTA
CATACAGGAA ATTCTGAGTC ACTTATAGGA TTCACCAGTA CATCAGGTGT TGCAAAGGCA
ATTGAAGTAC TGTCATCTCT ATCTGAACTT GAAGTCCCCG CATTACCAGA TGTAATAAAT
AACAATACAT TGGTTGAGTA TTTATCAGAT AATTTCGATT CAGCATTGAT TTCTTATTCT
TCATCATCGC TAAAACCTAA TAGCATGATT AATATTAGTA GAGAAAATGT ATCTACATTT
AGTTATTATA CTGATGATAT TCAACTGCCA TCTTTTGGTA CATCCGTAAC GATCCTTGTC
AGGACTAATG ATAATACTGT CGTAAGGTCT CTATCGGAAA GTTATACGAT GAATTCTAAT
AGCAGTAAGA TGGTTGTGTT TAATGTTTTA CAAAAAGACT TTTAA
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| Protein sequence | MKNQWQHQYF LSYSELVANF PSPEKVVSDY IKHKFSTTLP WFGWADPDNL YFIRFTQSRS
NNKSYTGWDH LGKYAIETLT LTQAAIVNIG SRFDIFDEAN STAGIYKTNN ADSFDETNEA
KMLPSEYLYF LRDCDFSNLY NKALSDYWAE NYEKFSTLLQ NYYISSAYYL YKDSAISKDE
YEFSIDAIFN KKNKILRYYF DVYGYYSSDM FVAMNDNKTM LFIPGATNPF IFADNITDLR
DKIKALISDK NTRELFSKHF SLYDRQDGNT YLGVNSMLEQ IVSGVVDTNY IMYSNKNIRE
RNVFESMAFS TRERSFNDGD VIIKSNAEVQ RDYALNVLQT ILSLSPIFDI VLPEVSIPIS
LGITASSVGI SFDELINGDT YEERRSAIPG LATNAVLLGI SFAIPFLISK AEENKLIINN
LVGSDENILN KNNLGDFLEK YNISESDIPE NGSLVINLKN TNVPVRLVKL NDEEGEIVAI
KGSTLSGIYY EVDTETGYEI LSRRVFRTEY NEKIYWTRGG GLKGGQPFNF EGLDIPVYFI
DKPYSELASS VELSFVNDDS PLLFPEMDSR LPKPTPELDI KYYSSNLSSF KEDTVILMRG
TTEEEAWNIA NYKTAGGSNK DLEENFIEAG PQFNLSFSEY TSSINSADTA SRKHFLVIIK
VQVKYISNDN VLYANHWAIP DEAPVEVLAV VDRRFIFPEP PVKPKLSFIQ KIANRFLTEN
VAEISSINFR RLNSGNINVL KGRGVFSSRR LREIYLRFDA ANADELRPGD VYVKKTKFDS
MGYDSHFYNE GIGINGAPTL NTYTGEYVAD SSSQGATYWL KYNLTNETSI IKVSNSARGA
NGIKIALEEI EENKPVVITS GTLTGCTVVF ARKGEYFYAV HTGNSESLIG FTSTSGVAKA
IEVLSSLSEL EVPALPDVIN NNTLVEYLSD NFDSALISYS SSSLKPNSMI NISRENVSTF
SYYTDDIQLP SFGTSVTILV RTNDNTVVRS LSESYTMNSN SSKMVVFNVL QKDF
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