| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2584 |
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| Symbol | |
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| ID | 6088912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2839991 |
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| End bp | 2840443 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641597652 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001721314 |
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| Protein GI | 170024809 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGATT CCTCCTCGCC GTCACTGTAT GAGCAATTGC TGGGCAATTT CACCGGCGGG
CTTGACCTGC ATCAGGTCAG TGACGAAAAC CAGGTCATTC TCTCGGTGCT GGACAATATG
CAGCGCATTC TTAATTGTCG GGCCGGAACA CTCAGTCATC TGCCCGATTA TGGCCTGCCG
GACATGAGTA AAATTCTGCA GGGGTTGCCG GGCAGCGCGC ATTCGCTGCT GACCACGCTG
TCCGCTACCT TGCTGAAGTA CGAGCCGCGT CTGAAAAGTT TGCAGGTGAT TCTGTTGCCA
CAGACCACAC CCGGTCATCT GGAATACGCC ATTGATGCGG AGCTGAAAGG GCTGGGACTG
GTGCGGTATG GCACGGCGTT TATGCCTGAG GGTAGGGTGC TGATGCGCCA TCTTAAACAA
CAACACTACC TCAATCAGCG GGAGTCATTT TGA
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| Protein sequence | MPDSSSPSLY EQLLGNFTGG LDLHQVSDEN QVILSVLDNM QRILNCRAGT LSHLPDYGLP
DMSKILQGLP GSAHSLLTTL SATLLKYEPR LKSLQVILLP QTTPGHLEYA IDAELKGLGL
VRYGTAFMPE GRVLMRHLKQ QHYLNQRESF
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