Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2484 |
Symbol | |
ID | 6088463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2716811 |
End bp | 2717197 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641597550 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001721214 |
Protein GI | 170024709 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.151206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAG AAAATCATCT CGCGTTAGTC TGCGCCCTCA GTAAATGGGT CGAAACCCAC CTAGGGCGGG TCATCTATCT TGAAGAGTTA GCCGCATACT CAGGTTATTC GCTTTGGCAT ATGCAAAAAA TATTTAAAGA TGTCACTGGC GTGTCACTGG GTAAGTACAT ACGGGAGAGG CGATTAGCAG GCGCTGTTTA TCAGCTAAGG AGCAGTGATA GCACTATTTT CGATATCGCT TTAGATTTTG GTTTTGGTTC ACAATCACAC TTTACGTATA TGTTTAGAAA GCATTACGGC ATCACTCCGT ATGACTTCAG ACAAAACACA GATATTGACC TTAATATTGC ATTACCTTTA CATGCTATTC ACCAAAAACA GGCCTGA
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Protein sequence | MSQENHLALV CALSKWVETH LGRVIYLEEL AAYSGYSLWH MQKIFKDVTG VSLGKYIRER RLAGAVYQLR SSDSTIFDIA LDFGFGSQSH FTYMFRKHYG ITPYDFRQNT DIDLNIALPL HAIHQKQA
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