| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2274 |
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| Symbol | |
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| ID | 6088535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2525991 |
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| End bp | 2528582 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597335 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001721004 |
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| Protein GI | 170024499 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAATCG CTCCTTGGCT CTCATGCTTG CTGACACAAA GCTTGCTGGT CACCCATATT
TCGTCAGCGG CGGATAAGAA CAATCAAGAC GACTATATAT TTGATGATGC GTTAGTGCGC
GGTTCATCAC TCGGTTTAGG ATCGATTGCC CGTTTTAATA AAAAAAACAG TTACGACGCG
GGCCAGTATC AAGTTGATAT GTATATGAAC AACAAATTTG TTGATCGCCT AAAAATGCTG
TTTGTTGATA AAGATAACAG TGTTGAACCT TGTCTGTCTG TTGCGCAATT ATTACAAGCG
GGTGTAAAAG AAGAGGCCCT GAAAACAGCA GATCCTAAAA CGCCATGTTT GGCCTTCCAA
TCCATACTTC CGGCCAGTGA CTTTCGATTT GATCACGCTA AATTGCGTTT TGATCTGTCC
ATCCCTCAGA AATTTGTTAA AAACGTGCCC CGTGGCTATG TTGACCCGAA AAATCTCACT
GCAGGCAATA CGATTGGTTT CAGTAATTAC AACTTGAATC AATATCACGT GGATTACAAC
AAAGAGGGGA TTAAGCGCAC CACAAACTCT ACTTATCTGA GTCTGAACAG CGGTATCAAT
ATCGGCATGT GGCGTTTTCG TCAGCAAGGA TCCCTACGTT ATGACGCTAG CCGAGGGACT
AACTGGACAT CTAATCGTCT GTACAGTCAG CGCGCCCTGC CGACTATCGG CAGTGAAATT
ACGCTGGGTG AAACCTTCAG TTCCGGCCAG TTTTTCTCCA GTCTTGGTTT TCTCGGTGTC
GCGCTGTCAA CGGATGATCG CATGTTACCC GAATCGCAAC GGGGCTATGC ACCGGTTGTC
CGTGGTATTG CCAGAACCAA CGCGCGAGTG ACGGTTTATC AAAACAACCG TTCGATTTAT
CAAACCACGG TATCACCAGG CGCATTTGAA TTTAATGATT TATCGGTCAC CCATTTTGGG
GGTGACCTGA CGGTTGAAAT CAATGAAGCT GATGGCAGTG TAAGCACCTT TCAGGTGCCA
TTCGCCTCTG TCCCGGAATC CCTACGCCCC GGCTATTCAC GTTATAGCTT TGCGGCCGGG
CAGGTTCGCG ATGTTGGCAA TAACGAGACG TTCAGCGAGT TGACCTACCA ACAGGGTATC
AGTAATGCCA TCACAGCTAA CACAGGGATC CGGCTGGCTT CGGGTTATCA GGCTATCATG
CTGGGCGGTG TGTTTACCCA CTATATTGGT GCGTTAGGTC TGAATACAAC CTATTCCCAT
GCCCGTTTAC CCGATGGGGA ACAGCAGCAA GGCTGGATGG CAAAAGCCTC TTTTAGCCGT
ACCTTTCAAC CCACGAATAC CACGTTATCC GTGGCAGGTT ACCGCTATTC AACTGACGGT
TACCGTGATT TAAGCGATGT ACTGGGCGTG CGGGCGACCA GCAATGACAG TAGCTGGAAT
TCCAGTACTT ATCGGCAACG GAGCCGGGCT GAAATATCCC TCAACCAAAA TTTTCACCGC
TACGGTTCAT TATATTTAAC TGCCTCCTCA CAAGATTATC GAGATGATCG TTCAAGGGAT
TCACAGTTAC AACTGGGTTA TTCCAACACC TTCTGGCGTA ATACCAGTTT CAATCTGGCG
ATTTCACAGC AGAAAACCGG AGGCGCAAAT AAAATTTACT TCGTTGACCC AGGCAGTGGC
ATGCCAGCCT CAAATGGTGC GAACACACTA GCCACCCGTG AAACTGTGGC CCAAATGTCA
ATTTCATTCC CACTAGGGGG TAGCTCGTCT GCACCTTATG TCTCGGCTGG CGCAGTAAAC
AGCAGAACTA GCGGAGCCAG CTATCAAACC TCACTTTCGG GAACCATGGG CAGTGACCAA
ACCGCAGGCT ACAGTGTGGA TGTTGCCCGT AACGAGCCAA CCAACGAAAA TACCTTAAGC
GGCAGTTTGC AAAAACAGCT CCCGACCACC AGTTTGAGTG GCAGTGCCTC ACGCAGCCCC
GGTTACTGGC AAGGTTCTGC CAGCGCCCGT GGATCGGTCG CATTCCACCG TGGCGGCGTG
ACGCTTGGCC CTTACCTAAG CGACACTTTC GCCCTGATAG AAGCGAAGGG TGCCAGTGGT
GCCAAAGTAA TGTATGGGCA AGGGGCCCGT ATTGACCGCT TCGGCTATGC ATTGGTCCCG
ACATTGACAC CGTATCGCTA CAACACACTC TCTCTCGATC CCGATGGTAT GGATTTCAAT
ACTGAGTTGC AGGATGGAGA GCGACAGATT GCGCCTTATG CTGGCTCTAC GGTGAAAGTG
ACGTTCCGGA CCCTCAACGG TTATCCCGCA TTAATCACAA TTAAAATGCC CGATGGCAGC
CAATTGCCTA TGGGAACCGT CGTTTATAAT TACAACGGCA AGGGCACTAA CGATAAGAAT
GACATCGTGG GTATGGTCGG GCAGTCGAGC CAAGCCTATC TACGGGCGGA GGAGCTCAGT
GGTACCCTCA CATTGGTGTG GGGAGAGAGT AGCAAAGAAC GCTGTCAGTT AGATTACGAT
CTGGGTAAGC CGACGGATAA CGATAAACAG CTGTATAAAC TCGATGCCTT GTGTGTCGCG
GTACAGCAAT AA
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| Protein sequence | MRIAPWLSCL LTQSLLVTHI SSAADKNNQD DYIFDDALVR GSSLGLGSIA RFNKKNSYDA
GQYQVDMYMN NKFVDRLKML FVDKDNSVEP CLSVAQLLQA GVKEEALKTA DPKTPCLAFQ
SILPASDFRF DHAKLRFDLS IPQKFVKNVP RGYVDPKNLT AGNTIGFSNY NLNQYHVDYN
KEGIKRTTNS TYLSLNSGIN IGMWRFRQQG SLRYDASRGT NWTSNRLYSQ RALPTIGSEI
TLGETFSSGQ FFSSLGFLGV ALSTDDRMLP ESQRGYAPVV RGIARTNARV TVYQNNRSIY
QTTVSPGAFE FNDLSVTHFG GDLTVEINEA DGSVSTFQVP FASVPESLRP GYSRYSFAAG
QVRDVGNNET FSELTYQQGI SNAITANTGI RLASGYQAIM LGGVFTHYIG ALGLNTTYSH
ARLPDGEQQQ GWMAKASFSR TFQPTNTTLS VAGYRYSTDG YRDLSDVLGV RATSNDSSWN
SSTYRQRSRA EISLNQNFHR YGSLYLTASS QDYRDDRSRD SQLQLGYSNT FWRNTSFNLA
ISQQKTGGAN KIYFVDPGSG MPASNGANTL ATRETVAQMS ISFPLGGSSS APYVSAGAVN
SRTSGASYQT SLSGTMGSDQ TAGYSVDVAR NEPTNENTLS GSLQKQLPTT SLSGSASRSP
GYWQGSASAR GSVAFHRGGV TLGPYLSDTF ALIEAKGASG AKVMYGQGAR IDRFGYALVP
TLTPYRYNTL SLDPDGMDFN TELQDGERQI APYAGSTVKV TFRTLNGYPA LITIKMPDGS
QLPMGTVVYN YNGKGTNDKN DIVGMVGQSS QAYLRAEELS GTLTLVWGES SKERCQLDYD
LGKPTDNDKQ LYKLDALCVA VQQ
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