| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2257 |
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| Symbol | |
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| ID | 6087274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2508008 |
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| End bp | 2509192 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641597322 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001720991 |
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| Protein GI | 170024486 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TTATAACGGA TCAGCGTCAC CAATTTTCCT CACGAGTGAA TGACCTTCAC
CCGTCGCCAA TTAGGGAAAT ACTGTCTGTC ATTGATCGTC CGGGAATGAT CTCGTTTGCC
GGCGGATTAC CCGCAGTAGA AAGTTTTCCT CATATGAGCC TTGAGGGAAT GCCGCAGCCG
ATGCTGCAAT ATGGCGCGAG TGAAGGGGAG CTGGAATTAC GTCAACAGAT TGCTCAAAAT
TTGTGTGAGC GAGGTTTATC CTGTACTGAG GAACAAGTCC TGATTATTTC AGGCTCACAG
CAGGGCATTG ATCTGGTCGC TAAGTTGTTT ATTGACGAGG GAACCCCCGT CGCCGTTGAA
TCGCCTACCT ACCTACCTAC CTACCTACCT ACCTATCTGG CTGCGTTACA GGTATTCCGT
TTTTTCGGTG CTCAATTTGT GGCTTATGAT TCAACTCAGC CTGATATCGA CAAGCTTCGC
ACCGAAAAAC CTGCTTTTGC TTATACTATT CCGACCTTCC AGAATCCAAG CGGTCACTGC
CTTGATACTG AACAACGAGA GTTACTGGCG AAGACATGTG ATGACATTAT GTTACCGCTC
TTTGAAGATG ACCCGTACCA TGACTTGGTT TATGACCCTT GTGAGCGTAA GCCAGTGTGT
GCTTCATTAC AGCGAGCTTC GTGGATTTAC CAAGGATCTT TTTCTAAAAG TTTATCCCCG
GCGCTGCGTT TGGGCTATCT TGTCGCATCT TCAGAATTGA TTCCCTATTT GACACGTTTA
AAACAAGCCG CAGATTTGCA CAGCAGCCGG ATCAGCCAAT GGTTAGTGTT ACAGCAGTTG
CGTAGCCCTA GGCATACTGA GCATATGCAT GAACTGGCAG CCTATTATCG AACTCGCCGT
GATGCGTTTG AAATCTCCCT ACAACGCCAT TTTGGCTCTC TTGCGACGTG GAAAAAACCG
GCTGGAGGGC TGTTCTTCTG GTTAACCCTT AATCGCTGCA TAGATACTCG TCAACTCTTG
CCTAAAGCGC TGGCAAGCAA TATTGCATTT ATGCCCGGAG AGTCGTTCCT CCCTCATTCA
TCTGAAGGCT GCGGTCAGTT ACGGCTTAAT TTTAGCCATG CGACGGAAGA ACAAGCGGAT
GTAGGGCTGA AAATATTAGC GGGTTTAGTG CAGGAACATG CATAA
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| Protein sequence | MNKIITDQRH QFSSRVNDLH PSPIREILSV IDRPGMISFA GGLPAVESFP HMSLEGMPQP
MLQYGASEGE LELRQQIAQN LCERGLSCTE EQVLIISGSQ QGIDLVAKLF IDEGTPVAVE
SPTYLPTYLP TYLAALQVFR FFGAQFVAYD STQPDIDKLR TEKPAFAYTI PTFQNPSGHC
LDTEQRELLA KTCDDIMLPL FEDDPYHDLV YDPCERKPVC ASLQRASWIY QGSFSKSLSP
ALRLGYLVAS SELIPYLTRL KQAADLHSSR ISQWLVLQQL RSPRHTEHMH ELAAYYRTRR
DAFEISLQRH FGSLATWKKP AGGLFFWLTL NRCIDTRQLL PKALASNIAF MPGESFLPHS
SEGCGQLRLN FSHATEEQAD VGLKILAGLV QEHA
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