| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2119 |
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| Symbol | |
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| ID | 6088187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2349746 |
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| End bp | 2350831 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641597187 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001720858 |
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| Protein GI | 170024353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0387524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGGGT CAGTTACGGC AGTCATATTG GCGACAGCCA TCTCCTTTGG TTGCGTCAGT
AAAAACGCTA AGGCTCTCGT GGCGGGGGGT ACCTCGCCAC GGTCAACATC AAAATCTATG
TTAACCCCAG GGGCTACGGC TAGCAGTACC CCCACGATGT TATCTCAGCA AGGGCGTGAT
CCGTCTCAGT TTCCAGCTTA TGTTGAGCAG TTAAAAGCGC AAGCCAGGGC TAAAGGCTAT
ACAACCGAGA CCTTGGATAC GGCTTTTGCT AATATTCATT TTGTCGATCG AGTCATCAAA
TCAGACCGTA ATCAATTAGA AAAGAAAATC ACGCTGGATG ATTATCTAAC CAGAGTACTT
CCGCGAAAGA GAATTGAGCA GGGTAGAGCA CTTTATCAAC GTTACCAGCC GCAGTTATCT
CAGGTGAACG CACAATATGG TGTCCCTGGG CGGTATATTG TCGCGCTCTG GGGTATGGAA
AGTGCTTTTG GTCAAATTCA AGGTAAAGAA GATGTGATTT CCGCTTTATC TACCTTGGCT
TTTGAAGGGC GTAGGGAAGC TTTTTTTACC AAAGAACTGA TGGCTGCGTT GGAAATTATT
CATCAAGGGA AGGTTGACGA CCCCCAATTG AGAGGATCTT GGGCGGGGGC GATGGGGCAA
AGTCAGTTTA TGCCCAGCTC TTTCCTGACG TATGGTGCTG ACGGTGATAG TGATGGAAAA
GTTGATATTT GGAATAATAT TGATGATGTA TTTGCTTCTA CTGCTAATTA TCTGTCTACT
CAAGGTTGGA AATCTGAACA GGGATGGGGC CAGGAAGTCA CGTTACCGCA AGATTTTAAT
GTGAAATTGG CGGGGTTGGA CGATGGGCAA GCCAAGAGCG TTGCCCAATG GCAGAAACTG
GGTATCACGC CGGTACAAAA CGCGCACTTT GCTGAATCTG CTGCGCGTGC CTGGGTGATC
ATTCCTGATG ATCTAAAGGG GCGTGCTTTT CTGGTTTATG ACAATTTCCG GACGATCATG
CATTGGAATC GCTCTTACTA TTTCGCTATT AGCATTGGTA TGATGGCCGA TAGTATCGGT
CAATAG
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| Protein sequence | MKGSVTAVIL ATAISFGCVS KNAKALVAGG TSPRSTSKSM LTPGATASST PTMLSQQGRD
PSQFPAYVEQ LKAQARAKGY TTETLDTAFA NIHFVDRVIK SDRNQLEKKI TLDDYLTRVL
PRKRIEQGRA LYQRYQPQLS QVNAQYGVPG RYIVALWGME SAFGQIQGKE DVISALSTLA
FEGRREAFFT KELMAALEII HQGKVDDPQL RGSWAGAMGQ SQFMPSSFLT YGADGDSDGK
VDIWNNIDDV FASTANYLST QGWKSEQGWG QEVTLPQDFN VKLAGLDDGQ AKSVAQWQKL
GITPVQNAHF AESAARAWVI IPDDLKGRAF LVYDNFRTIM HWNRSYYFAI SIGMMADSIG
Q
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