| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2047 |
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| Symbol | trpA |
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| ID | 6088355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2279252 |
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| End bp | 2280058 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597114 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001720787 |
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| Protein GI | 170024282 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGTT ATCAGCAACT TTTTAAGCAG TTAGCCGCCA AAAAAGAAGG TGCCTTTGTT
CCTTTCGTCC AGCTTGGCGA TCCCTCTCCG GCGATGTCAC TCAATATTAT TGATACGTTA
ATTGCGGCAG GTGCAGATGC ATTAGAGTTA GGGATTCCGT TCTCTGATCC GTTGGCTGAT
GGCCCTACCA TACAAAATGC GGCGTTGCGT GCCTTTGCTG CGGGTGTCAC TCCGGCTATT
TGTTTTGAAA TACTGGCCGA AATCCGCCAA AAACACCCCA CAATACCTAT TGGCCTGTTG
ATGTATGCAA ATCTGGTATT CCACAATGGT ATTGATCACT TCTACCAGCG CTGTGCTGAG
GTGGGTGTCG ATTCGGTGCT AATTGCTGAT GTGCCATTTG AAGAGTCTGC CCCTTTCCGG
GCAGCGGCCT TACGTCACGG GATTGCACCC ATTTTCATCT GCCCGCCTAA TGCCGACGGT
GACTTACTGC GAGAAATCGC TTCTCATGGT CGTGGTTACA CTTACCTGTT ATCACGTGCC
GGAGTCACCG GTGCAGAAAA TCACGGCCAG TTACCGTTAA ACCATCTGGT AGATAAACTG
CGTGAATATA ATGCAGCGCC CGCATTGCAG GGCTTTGGTA TTTCAGAACC CGCGCAAGTA
AAAGCCAGCC TGGCGGCGGG CGCGGCGGGT GCTATTTCAG GCTCAGCAAT CGTCAAAATC
ATTGAAAAAA ATGTTGCACA ACCAGTTGAA ATGTTAGTTC AGCTAACCCG CTTCGTCACA
GAGATGAAAG CGGCAACCCG CAGCTAG
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| Protein sequence | MERYQQLFKQ LAAKKEGAFV PFVQLGDPSP AMSLNIIDTL IAAGADALEL GIPFSDPLAD
GPTIQNAALR AFAAGVTPAI CFEILAEIRQ KHPTIPIGLL MYANLVFHNG IDHFYQRCAE
VGVDSVLIAD VPFEESAPFR AAALRHGIAP IFICPPNADG DLLREIASHG RGYTYLLSRA
GVTGAENHGQ LPLNHLVDKL REYNAAPALQ GFGISEPAQV KASLAAGAAG AISGSAIVKI
IEKNVAQPVE MLVQLTRFVT EMKAATRS
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