Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1887 |
Symbol | |
ID | 6088734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2093095 |
End bp | 2094375 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596958 |
Product | hypothetical protein |
Protein accession | YP_001720631 |
Protein GI | 170024126 |
COG category | [S] Function unknown |
COG ID | [COG4950] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01926] uncharacterized peroxidase-related enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGCAAT TTCGCAGGAG AAATAATGCC CATTGGTATC ATGAGACTCA GTGTAGCGGC AGCCTGGAGC ATTGTAGCGG TAGCCCAGTG AATATTTCCA CGACAGTGAA TGTTCCCACG ACAGTGAATG ATGAAAACCC CCCTGTTGAT ATTCGGCCAC GTGCTCCCAG CGAGAGTGAC AACATGAGCA CTGGCAGTAA TATAACTGAA CAGAGCATCA TAACTGAACA GGGCATCTTT CTACTTGGCG TGACAGAAAA CATCGCTCCT ACATTACAAG ACACCCTCTA CCATGAGCAG CCTATTCTTA CTGCCTCCGA CGCCATGTAT CAGGCCCTGT TCCCAACGAT TATCGAGATC AACCACACCA ATACCTTCTC ACTTTATGAT CGGTTAAGTA CTGCGCTGAC GGTCGCTCAG GTTACCGGGA TTCAGCGGCT ATGTAGCCAC TATGCTCTCC GTCTCGCGCC ACTCCCCAGC CCGGATGCCT CAAGGGAAAG CAATATTAGG CTAACGCAAA TTACGCAATA TGCCCGCCAA TTGGCCAGCC AACCTACGTT GATCGATAGG CATGCTTTAG CGCAATTGCA TGACGTGGGT TTAACTGATA GCGATATCAT TATTTTATCG CAAATTATTG GATATGTGGG ATATCAAGCC CGAGTGGTCG CTGGCATCTC TGCACTGGCT GGTTACCCTA CCGTGATGCT CCCCGGTTTC CCCCGCATGG AAGATGCCGC CCCCAACCCA TTACCAGATG TCATGCCCAA TTGGCAAGGT TGGCTACCGT CTCATGCGGC AAACGACGAT CAATCCGATA AAGAACCTGA CGAAACGGCC AGCACACTGA CTGAACTGTT GGGCCATCAC CAGCAAAGTT TGCTCGCTTA TCACGCCATT ACCACTCACC AGCCCAACTC ACCTCAATTG CAACGTGACT GGCTGGAACT GGTGGCATTG GTCAGCGCAC GAATCAATGG CAGCCTCTAC TGCCAAGCCC GTCACAGACA ACATTTACAG CAACTGACGG AGCAGCCCCT GTTGGTCACT GAGCTGTTAA AAGGGATTGA TCACGCGTTA TTCTTGTTAC CCGAACAACA AATACCCCAT CAGCTAATCA GTGTAACCGC CGAGCTCACT CGCGCCCCGG AACGCTTTAA TCATCAGCAT GTTAAACGTC TACAGACCCT TGGCGTCAGT GATACTCAAG TCATACGTAT TATTTTCAGT ATCGCCATTA CTGGTTGGAC CAACCGCCTA CGATATACGT TAGGAAAATA G
|
Protein sequence | MVQFRRRNNA HWYHETQCSG SLEHCSGSPV NISTTVNVPT TVNDENPPVD IRPRAPSESD NMSTGSNITE QSIITEQGIF LLGVTENIAP TLQDTLYHEQ PILTASDAMY QALFPTIIEI NHTNTFSLYD RLSTALTVAQ VTGIQRLCSH YALRLAPLPS PDASRESNIR LTQITQYARQ LASQPTLIDR HALAQLHDVG LTDSDIIILS QIIGYVGYQA RVVAGISALA GYPTVMLPGF PRMEDAAPNP LPDVMPNWQG WLPSHAANDD QSDKEPDETA STLTELLGHH QQSLLAYHAI TTHQPNSPQL QRDWLELVAL VSARINGSLY CQARHRQHLQ QLTEQPLLVT ELLKGIDHAL FLLPEQQIPH QLISVTAELT RAPERFNHQH VKRLQTLGVS DTQVIRIIFS IAITGWTNRL RYTLGK
|
| |