| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1828 |
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| Symbol | |
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| ID | 6088539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2027061 |
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| End bp | 2028068 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596896 |
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| Product | vtamin B12-transporter permease |
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| Protein accession | YP_001720572 |
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| Protein GI | 170024067 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4139] ABC-type cobalamin transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAA GTCAGTTATT TACCGCACTT CAACAACGGC AGCGGCAGCG CGACTATCGT
TATCTTACTG GGCTGGTTGT CATGCTTTTG TTCGCGCTAC TCATCAGTTT ATGTGCGGGT
GATGTCTGGA TTTGGCCAGA GCACTGGTTC AGTGAAAGTG GCAAATTATT TGTTTGGCAA
CTACGTTTGC CCCGATCTAT GGCTGTAATT ATGGTTGGTG CCAGTCTGGC CGTGTCGGGT
GCTGTGATGC AGGCACTGTT TGAAAATCCG TTAGCTGAAC CGGGTCTACT TGGCGTGGCA
AATGGCGCAG GTGTTGCATT GGTGACGGCC GTATTATTAG GTCATGGATT ATTGCCAATT
TGGGTTCTGA GCACGTGTGC TATTATTGGC GCATTGTTGA TGACATCTAT TCTGTTAAGT
TTCACCCGTC GCCGTTTATT AACTAATGCC CAGCTATTAT TGGTCGGTGT AGCCTTAGGT
ATTATTTGCA GTGCAATGAT GACTTGGGCC GTCTATTTCA GCACCAGTTT GGATTTACGT
CAGCTCATGT ATTGGATGAT GGGGGGGTTC AGCGGTGTTG ACTGGCGTCA GCAAAGTTTG
GTGCTGGCTC TCTTGCCTAC CGTCATATGG CTTTGCTGCC AAGGCCGTGT CCTGAACTTC
ATGTCACTCG GTGAGCAGCA GGCCAGGCAA TTGGGGGTGT CGCTTCATTT ATGGCGGAAT
TTATTAGTAC TGGCGATCGG ATTACTGGTC GGCATTAGTG TTGCACTCGC GGGTGTCATC
AGTTTTATTG GCTTGGTTAT TCCTCATATT TTACGGTTAA CCGGTTTAAC TGATCAGCGC
CGGCTATTAG CGGGCTGTGC ATTCGCCGGC GGGGGGGTAT TATTATTAGC TGATGTTGTC
GCTCGCACGG TATTATCTTC GGCAGAGCTA CCGATTGGTG TGGTTACCGC AACATTAGGA
TCGCCATTAT TTATCTGGTT ACTGATACGG GTGAAAGGAG TAAAGTGA
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| Protein sequence | MQTSQLFTAL QQRQRQRDYR YLTGLVVMLL FALLISLCAG DVWIWPEHWF SESGKLFVWQ
LRLPRSMAVI MVGASLAVSG AVMQALFENP LAEPGLLGVA NGAGVALVTA VLLGHGLLPI
WVLSTCAIIG ALLMTSILLS FTRRRLLTNA QLLLVGVALG IICSAMMTWA VYFSTSLDLR
QLMYWMMGGF SGVDWRQQSL VLALLPTVIW LCCQGRVLNF MSLGEQQARQ LGVSLHLWRN
LLVLAIGLLV GISVALAGVI SFIGLVIPHI LRLTGLTDQR RLLAGCAFAG GGVLLLADVV
ARTVLSSAEL PIGVVTATLG SPLFIWLLIR VKGVK
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