| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1816 |
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| Symbol | |
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| ID | 6089265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2015288 |
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| End bp | 2015950 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641596884 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001720560 |
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| Protein GI | 170024055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTCAA AAGTCGGTTG CCTAATGGCA ATTTTATTGT TGGCGGGGTG TGCTAAACAA
ACCCCACCAC CACAAGCGAA TAACGGGTGG CTGAAAAAAA CGCCACAGGG CAATTCTCTT
AACGTAGCGA AAAGCAGTGC CGGTTCAACT ACCGTTGCTT ATAGCGACGT CATTAAACAA
GCCGCGAGCC ATTACGGCGT TGATGAAACA CTGATTAAAG CGATTATCCA GGTGGAATCT
GGTTACAACC CGGATGTTGT GAGTAGATCC AATGCCGTAG GCTTGATGCA GATTAAAGCC
TCTACCGCCG GGCGTGATGC GTACCGGATG AAAGGGCGAA ATGGTCAACC GAGCTCTCGT
GAGCTAAAAG ATCCAGTGAA GAATATTGAT ATTGGTGCTG CTTATATCAA CATTCTACAA
AATCAGCAGT TAGCGGGGAT CAACGACCCG CAGACATTAC GTTATGCCAC CATCGTTTCT
TATGCGAATG GCGCGGGGGC TATGTTGCGG ACTTTTTCAT CAGATAAACG TCTGGCAGTC
AATAAAATTA ATAGTCTTAG CCCAAACGAA TTTTATCAGC ATATACAAAA GAAGCACCCG
GCTGCACAGG CTCCACGTTA CTTGTGGAAG GTGGATACCG CTTACCGGGC GATGTCAGAG
TAA
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| Protein sequence | MNSKVGCLMA ILLLAGCAKQ TPPPQANNGW LKKTPQGNSL NVAKSSAGST TVAYSDVIKQ
AASHYGVDET LIKAIIQVES GYNPDVVSRS NAVGLMQIKA STAGRDAYRM KGRNGQPSSR
ELKDPVKNID IGAAYINILQ NQQLAGINDP QTLRYATIVS YANGAGAMLR TFSSDKRLAV
NKINSLSPNE FYQHIQKKHP AAQAPRYLWK VDTAYRAMSE
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