Gene YPK_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1640 
Symbol 
ID6088136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1817933 
End bp1819207 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content46% 
IMG OID641596710 
Producthypothetical protein 
Protein accessionYP_001720386 
Protein GI170023881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC TAAATACCCT GGTTTGTATC ATTGGTTTAA CATCATTTTC TTCCTCTGCG 
AAGCTGGTTA ATGCTGAGCA TCTGGATGCC TTATATCAAA AGGTCACGGT GGCGAACAAA
ACAGAACTGG GTCTGATTCA TATCTATAGC GAATTTCCAG ATTACCGCTG GGTTAAAGAT
CCCATCGAAG GTGTATCCGC CATTGATGAT GTCGCCCGCG CGGCAATTTT TTATCAACGT
CAATACCAGG CAACAGGCTC AGCGGCAGAT TTAGAAAAAG TAAAATCGCT GGTCGAATTT
ATTCTGTATC AACGGGCAGA TAATGGTTAC TTCTATAATT TTATCTACCC TGATCATTCC
ATTAATAAAG AGTATAAAAC CAGTGTGGCG GAGCCAAATT GGTGGACATG GCGTGCATTA
TGGGCGCTGA CTCAGGTTTA TCCTACGCTG GTGAAAACCG ATAACGCGTT GGCGCAAAGA
ACCCGCGAGA CTATTTTCGC CACCATCGAT GTTATTTATA AAGACTTTAA TTTCAAACAG
ACTCGTGGCG AAAAAGAGGG CGTGGCGGTG CCAGAGTGGC TGCCTCATAC CGCTGGTGAC
CAAGCTTCTG TATTGTTGAT GGCCCTGAGC GATGCACAGG CGCTGGAAGC AAAACCAGAA
ATTGAAAAGA TGATGCGTTC ACTGGCGGCT GGCATCATGC TGATGCAGGT TAAGGATACA
TCTTCACCGG TGAATGGCGC TTTTTTAAGC TGGCAAAACC TGTGGCATGG CTATGGTAAC
AGCCAGGCTT ACGCTTTGTT GGTTGCGGGT AACCGGCTGG GCGATAGGGA TATGATTAAA
GCTGCCTTTA ACGAGCTGGA TCATTTCCAT CCTTGGTTGA TCAGTAATGG GTTGTTAAAT
GAGTTTACCG TTCGGCAGCA GGGTGAAAAA GTCACGCTGA TTGAACAGAA GAAGTTTTCC
CAGATTGCTT ACATCATCCG CCCGATGGTA TTTGCCAATA TCAAAGCTTG GGAGATTTCG
CGTGACGCCG TTTATCTGGA GCGCGCGGTG GATTTATCGC TGTGGTTCTT TAAAAATAAT
CCGGCACAGG CACAAATGTA TTACCCCGTA ACCGGGATCG CATTTGATGG TATTGATTCG
GCCACTACCG TGAATAAAAA CTCGGGAGCA GAATCCACGA TTGAAGCGTT GCTCACTCTT
CAGTTGATTG AATCTATCCC TGATGCCAAG CGCATGTTGG AATCGGCACT TGAAAAGCGG
AATATCAAAC AGTGA
 
Protein sequence
MKLLNTLVCI IGLTSFSSSA KLVNAEHLDA LYQKVTVANK TELGLIHIYS EFPDYRWVKD 
PIEGVSAIDD VARAAIFYQR QYQATGSAAD LEKVKSLVEF ILYQRADNGY FYNFIYPDHS
INKEYKTSVA EPNWWTWRAL WALTQVYPTL VKTDNALAQR TRETIFATID VIYKDFNFKQ
TRGEKEGVAV PEWLPHTAGD QASVLLMALS DAQALEAKPE IEKMMRSLAA GIMLMQVKDT
SSPVNGAFLS WQNLWHGYGN SQAYALLVAG NRLGDRDMIK AAFNELDHFH PWLISNGLLN
EFTVRQQGEK VTLIEQKKFS QIAYIIRPMV FANIKAWEIS RDAVYLERAV DLSLWFFKNN
PAQAQMYYPV TGIAFDGIDS ATTVNKNSGA ESTIEALLTL QLIESIPDAK RMLESALEKR
NIKQ