Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1631 |
Symbol | |
ID | 6088954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1807498 |
End bp | 1808577 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641596701 |
Product | ABC transporter related |
Protein accession | YP_001720377 |
Protein GI | 170023872 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAGCG TTTCTCTCGC AAATGTCGTG AAGTACTATG GAAAAATTAA AACGATTGAT AACGTCAATC TTGAAATTGC ATCGCGGGAA TTTATTGTCT TAGTTGGCCC TTCTGGCTGC GGAAAATCTA CGTTATTAAG AATGATTGCA GGGCTGGAGG ACGTTAACAG CGGTGAAATT AAAATAGAAG ATAAAGATGT CACCCAAACT AATGCGGGGG CACGCGGGGT ATCGATGGTA TTTCAATCCT ATGCGCTTTA TCCCCATATG ACCGTGCGAG AAAACTTGGC GTTTGGTCTC AAAAATATCA AAATCCCGAA GCAAGAGATC GCCGACAGAA TAGCTAATGC GTCAAATATC CTGCAACTGG ATAATTATCT TGAGCGCCTG CCGCAGCATT TATCCGGCGG CCAACGCCAG CGCGTCGCTA TTGGTCGATC TATTGTCAGT CGCTCCAAAG TATTTTTATT TGATGAACCT TTATCTAACC TGGATGCTGC GCTGCGTATT CAGATGCGAC AAGAGATCGG CAAACTGCAT GAACGCTTAG GTAAAACCAC AATATACGTC ACCCATGACC AAACGGAAGC CATGACATTG GCGGACCGGA TAGTCATTTT AAATCAAGGA AGAATAGAAC AAATCGGGAC CCCGGAAGAA GTTTATAACC ATCCAGCCAA TCTTTTTGTC GCCGGATTTA TTGGTGCCCC TAAAATAAAT CTATTTAATG CAGTTTATGA GCAGGATGGC TACGTTAATA TTAATGGACT CCGCTTTTTT ATTCCGCGAT TGGTGAATTT GAATTTGGCA ATGGGCGCCG TACTGACTTT AGCCATCCGC CCTGAACACT TCTCCTTAAC CAACAGCACC GAACTGAGTC TGGCAGTGAA GACAGACATC ACCGAAATGC ACGGAGATTC CACGGTGGTG CTATTTAGCT CAACAGAGCA CGGCACGCTA CAAATGAAAG TCCCCTATCA ACTGAAACTT TCCGTTGGTG AAGATGTTAC TATTGGCGCG TCCTGCGAAC ATATTTTAGT CTTTGATGAG CACGGTCAGG CAATACACGG CGAGTCATAG
|
Protein sequence | MASVSLANVV KYYGKIKTID NVNLEIASRE FIVLVGPSGC GKSTLLRMIA GLEDVNSGEI KIEDKDVTQT NAGARGVSMV FQSYALYPHM TVRENLAFGL KNIKIPKQEI ADRIANASNI LQLDNYLERL PQHLSGGQRQ RVAIGRSIVS RSKVFLFDEP LSNLDAALRI QMRQEIGKLH ERLGKTTIYV THDQTEAMTL ADRIVILNQG RIEQIGTPEE VYNHPANLFV AGFIGAPKIN LFNAVYEQDG YVNINGLRFF IPRLVNLNLA MGAVLTLAIR PEHFSLTNST ELSLAVKTDI TEMHGDSTVV LFSSTEHGTL QMKVPYQLKL SVGEDVTIGA SCEHILVFDE HGQAIHGES
|
| |