Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1580 |
Symbol | |
ID | 6087140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1748874 |
End bp | 1750190 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596650 |
Product | major facilitator transporter |
Protein accession | YP_001720326 |
Protein GI | 170023821 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.177691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGTA AGATCCCTAA TGCCCGTTGG TTCCGCGTTA TTGTGCCAAT AATGATTGCT TGTATTATTT CTTTTATGGA TCGGGTCAAT ATTAGTTTTG CTCTACCGGG CGGTATGGAA AGTGATTTGG CGATTACCAG CCAAATGGCC GGTTTAGCCG GCGGTATTTT CTTTATCGGT TATTTATTTC TACAAGTACC CGGTGGCCGT ATTGCAGTAC ATGGCAGCGG CAGAAAATTC ATTGCTTATT CTTTAGCGGT CTGGGCCATC GTCTCTATCC TGACCGGTTT TGTTACCCAT CATTATCAAT TGCTGTTTCT GCGTTTTGTC TTGGGGGTTT CCGAAGGGGG TATGTTGCCC GTGGTATTGA CCATGGTCAG CAACTGGTTC CCAGAGCGCG AAATTGGCCG CGCTAATGCT TTCGTCATGA TGTTTGCACC GATTGGCGGC ATGTTCACCG CACCGTTGTC GGGTTTTATC ATCAATACGC TCGACTGGCG TTGGTTATTC TTCCTTGAAG GCGGGTTGTC AGCACTGGTG TTGGTGATGT GGTGGTTTGT GATCAGTGAC CGCCCAGAGG AGGCCAAATG GCTATCAGCG CGAGAGCGTG ATTATCTGGT CACTGAACTG TCGCGGGAAA GAGCGGAACG AATGTTCAAT AAGCCGGTGA CCAATGCGCC GTTAAAAGCG GTATTTCTCA ATAAAGGTTT GATGAAGCTG GTGGCGCTGA ACTTCTTCTA CCAGACCGGG GATTATGGTT ACACATTGTG GTTGCCCACT ATCTTAAAAA ACCTGACCGG CGGCAATATG GCATCCGTCG GTATTCTGGC GGTGCTGCCA TTTGTGGCTA CCACCGCCGG TATTTATGTT ATTTCCGCAC TGGCGGATAA AACCGGTAAG CGCCGTCTGC TGATTATGAT TTCCCTGTTC TGCTTTGCTG CGGCGTTGGT GGCATCGGTT ATTTTCCGTC ACAACGTTCT TGTGTCATAT CTGGCATTGG TGGTCTGTGG CTTCTTCCTG AAAGCGGCAA CCAGCCCATT CTGGTCAATT CCTGGCCGTA TTGCGGTGCC AGAAGTAGCT GGTGGTGCGC GGGGGGTGAT TAACGGTTTA GGCAATCTGG GGGGCTTCTG TGGCCCCTAT CTGGTGGGGG TGATGATCTT CTTCTATGGC CAGAGCGCGG CGGTCTGCAT GTTGGCGGGA TCATTGATTA TTGCTGGGCT GATTACCTTA ACGTTGCCGA AAGAGTGTGA TGTCGAGGTG AAATCTACAG GGAAAGATAT CGCTGACAAC GGTTTGACTA AAGCGAAACG TGCGTAA
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Protein sequence | MDSKIPNARW FRVIVPIMIA CIISFMDRVN ISFALPGGME SDLAITSQMA GLAGGIFFIG YLFLQVPGGR IAVHGSGRKF IAYSLAVWAI VSILTGFVTH HYQLLFLRFV LGVSEGGMLP VVLTMVSNWF PEREIGRANA FVMMFAPIGG MFTAPLSGFI INTLDWRWLF FLEGGLSALV LVMWWFVISD RPEEAKWLSA RERDYLVTEL SRERAERMFN KPVTNAPLKA VFLNKGLMKL VALNFFYQTG DYGYTLWLPT ILKNLTGGNM ASVGILAVLP FVATTAGIYV ISALADKTGK RRLLIMISLF CFAAALVASV IFRHNVLVSY LALVVCGFFL KAATSPFWSI PGRIAVPEVA GGARGVINGL GNLGGFCGPY LVGVMIFFYG QSAAVCMLAG SLIIAGLITL TLPKECDVEV KSTGKDIADN GLTKAKRA
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