| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1390 |
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| Symbol | |
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| ID | 6087068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1532640 |
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| End bp | 1533236 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641596454 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001720137 |
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| Protein GI | 170023632 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.136474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGTCA AAATTGAAAA TATACAGTGT GAATTGTTAT CAAAGAACTG GTTTAAATTA
CACAAATACA CCTTTGATTT AAAAACAGAT GAGGGAACCT CGGTACAACA AATCCGTGAA
GTCTATGACC GGGGGAACGG TGCGACTATC TTGTTGTATA ACCGCCAACA GGGCACGGTG
GTGTTGATCG AACAATTCCG GATGCCAACC TATGTTAACG GCAATGCCAG CGGTATGTTG
CTGGAGGCGT GTGCCGGTTT ACTGGATAAC GATTCGCCAG AGGCGTGTAT CCGCCGTGAA
GCGATGGAAG AAACGGGTTA TCAGGTTGAT AAAGTACAAA AGCTGTTCGA GGCTTATATG
TCGCCGGGGG GTGTGACTGA GCTGGTCTAT TTCTTTGCGG CTGAATATCA CCCAGATCAA
AAGATAACCG ATGAGGTTGG GGTAGAGGAC GAGGTCATTG AAGTCGTCGA ATTGCCGTTC
CACGATGCTC TCGCGATGGT CGCGGATGGG CGAATTAAAG ATGGTAAGAC GATTATGTTG
TTGCAGTATG CGCAGATTCA TTTTTTCCCT TCGTCCTTGA CGCCACAGCG GTGTTAG
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| Protein sequence | MSVKIENIQC ELLSKNWFKL HKYTFDLKTD EGTSVQQIRE VYDRGNGATI LLYNRQQGTV
VLIEQFRMPT YVNGNASGML LEACAGLLDN DSPEACIRRE AMEETGYQVD KVQKLFEAYM
SPGGVTELVY FFAAEYHPDQ KITDEVGVED EVIEVVELPF HDALAMVADG RIKDGKTIML
LQYAQIHFFP SSLTPQRC
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