Gene YPK_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1289 
Symbolndk 
ID6089207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1418581 
End bp1419009 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID641596357 
Productnucleoside diphosphate kinase 
Protein accessionYP_001720040 
Protein GI170023535 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAG AACGTACTTT CTCGATTATC AAACCAAACG CTGTTGCCAA TAACAACATC 
GGTGCCATTT ATGCGCGTTT TGAAAGTGCT GGTTTCAAAA TCATCGCCGC AAAGATGTTG
CACCTGACCA AAGAACAGGC CGAAGGTTTT TACGCTGAAC ATAAAGGCCG CCCGTTCTTT
GATGGTTTGG TTGAATTTAT GACCTCTGGC CCCATTATTG TTCAGGTTCT GGAAGGCGAA
AATGCAGTAC AGCGCCATCG CGATATTATG GGGGCGACTA ACCCAGATAA TGCGCTGGCC
GGTACGCTAC GTGCTGATTT TGCCGACAGC TTCACCGCGA ATGCGGTACA TGGCTCTGAT
GCTGTTGAAT CTGCTCAACG CGAAATCGCG TATTTCTTTG CGGCAGATGA AATTTTTCCC
CGTAGCTAA
 
Protein sequence
MALERTFSII KPNAVANNNI GAIYARFESA GFKIIAAKML HLTKEQAEGF YAEHKGRPFF 
DGLVEFMTSG PIIVQVLEGE NAVQRHRDIM GATNPDNALA GTLRADFADS FTANAVHGSD
AVESAQREIA YFFAADEIFP RS