| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1287 |
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| Symbol | |
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| ID | 6089342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1413754 |
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| End bp | 1415118 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641596355 |
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| Product | pertactin |
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| Protein accession | YP_001720038 |
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| Protein GI | 170023533 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA GTAATACTCT TAATACGCGT CTGCTACCAC TGTCTATTTT AATTTCATCG
TTGGTTTCTG GCGGGGCTAT GGCTGTGTCA CAAATAGCAA CCACTGATAT ACCCGCAGCA
GTAACACCAA TAAAATCAAC ACCAACAGGT TCATTTGAGC GGAATTCGGC TGGTACAAGT
TTTGGATCAA ATGTAGATGT AGATGTAATT GATAATACAT CTACCGTACT CAACGCCAGT
GACTTCTCGC TGGCTGACAA AGCCACCGCG AACAACACCA CCCTGACTGG CGGTACCTTC
ACCGCTGCAG GTGATGCCGC GGTCACCGTA CTCAACGCAA GTGACTTCTC GCTGGCTGAC
AAAGCCACCG CGAACAACAC CACCCTGACT GACGGTACTT TCACCGTTGC AGGTGATGCC
GCGGTCACCG CGACGAACAT GAGTGGCGGT AAATTTGCGG TTAAAGGCAA AGCCAAGATC
AAAGACACCC AACTCAGTGC AGGTAATTTC ACTCTGGCTG AAAATGCCAC AGCGAATGAC
ACCACACTGA ATGGCGGTAA ATTTGACGTT TCGAACGAGG CTACAGCGAC TAACACCACC
ATTAATAACG GCCTGTTTAC GCTGAAAGAT GGCGCTCACG CGGACAGCAC CACAGTCAAT
AGCGGCACCT TCGTCATGGC CGATCAATCT ACGGCCAACG GCATCCAACT GGTAGACAGC
GCCTTCACAC TCGCAAGCGG TGCTAAAGCC TCCGGTATCA CCAAATTAAC TGGCGGTCAG
GCACAGGTAG CCGGTTCACT GGAAAGCTTG AGCCTTACCG GTGGCCGCGC AGACTTTGCC
AACAGCGCCA AAGCCTCTGG CCTGCTTGAT ATCAGCGCTG ATAGCCAGAT CATAATGAAC
CGCGGTGCAG ATACCGAACA AGCGAACCTG AACCTGGCTG GCCGCCTTGA ATTGCTCGCC
AGTGATGTTG CTCAGGCAGT GGCTCAGCCA GTTGCCCGTG CGGCCATGGA GTTATCAAAT
GCGCGTGCGG TCATGCCAGC CCCTGCAATG CCAGTCCCTG CCACCGCACC GGTTGCACAC
TTCGCCCTCA ACGATGTGGT TATGACCGGG GGCACTGTCG ATATGAGCAA CGCGAAAAAT
GCTCAACTGA CCATGGCTTC ACTGAATGGT ACAGGGAACT TTAACCTCGG TTCTGTCATG
CAAAGCGATT CGGTCGCGCC ATTAAATGTA TCCGGTGACG CGAACGGTGA CTTCATCATT
GCAATGAATA GCAGCGGTCA AGCACCAACT AACCTGAATG TGGTTAATAC CAACGGTGGT
GATGCACGCT TTGCCTTACC TACCTGCACA ATAACTTTGC AGTAA
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| Protein sequence | MKNSNTLNTR LLPLSILISS LVSGGAMAVS QIATTDIPAA VTPIKSTPTG SFERNSAGTS
FGSNVDVDVI DNTSTVLNAS DFSLADKATA NNTTLTGGTF TAAGDAAVTV LNASDFSLAD
KATANNTTLT DGTFTVAGDA AVTATNMSGG KFAVKGKAKI KDTQLSAGNF TLAENATAND
TTLNGGKFDV SNEATATNTT INNGLFTLKD GAHADSTTVN SGTFVMADQS TANGIQLVDS
AFTLASGAKA SGITKLTGGQ AQVAGSLESL SLTGGRADFA NSAKASGLLD ISADSQIIMN
RGADTEQANL NLAGRLELLA SDVAQAVAQP VARAAMELSN ARAVMPAPAM PVPATAPVAH
FALNDVVMTG GTVDMSNAKN AQLTMASLNG TGNFNLGSVM QSDSVAPLNV SGDANGDFII
AMNSSGQAPT NLNVVNTNGG DARFALPTCT ITLQ
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