Gene YPK_1279 details

Gene Information

• Locus tag: YPK_1279
• Symbol: hscB
• ID: 6090955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1406066
• End bp: 1406590
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641596347
• Product: co-chaperone HscB
• Protein accession: YP_001720030
• Protein GI: 170023525
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.989266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTATT TTACGTTATT CGGGTTGCCG GCTCGCTATT TGATTGACGG CAACCAACTC 
ACCACGCGTT ACCAGGAGTT GCAACGTCAA TTCCACCCCG ATCGCTTTGC CACCCAGCCC 
GAGCGTGAGC GTTTGGCCTC AATGCAGCAG GCTGCAACCA TCAATGATGC TTACCAAACG 
CTCAAGCACC CGTTAAAACG TGCCGAGTAT ATGCTATCTT TGCAGGGTTT TGATTTAGGC 
AACGAACAAC ACACTATGCG TGATACCGCG TTTCTGATGG AACAGTTGGA ATTACGTGAG 
GAGCTTGATG CCATTGAGCG CAAACCCGAT GCTGAAACTT TACTGGCTGA ATTTAGCCGC 
CGTGTGGCGC AGATGACAAC AACGCGCACG CAGCAAATGG TTGAGCAACT GGATGCGCAG 
CTATGGGTGC AGGCAGCGGA TACGGTACGC AAATTGCGCT TTCTGGATAA GTTGCAGCAG 
CAAGTTGAAC AGTTGGAAGA GCGCTTGTTT GACGATTTTG CCTGA 

 

Protein sequence

MDYFTLFGLP ARYLIDGNQL TTRYQELQRQ FHPDRFATQP ERERLASMQQ AATINDAYQT 
LKHPLKRAEY MLSLQGFDLG NEQHTMRDTA FLMEQLELRE ELDAIERKPD AETLLAEFSR 
RVAQMTTTRT QQMVEQLDAQ LWVQAADTVR KLRFLDKLQQ QVEQLEERLF DDFA