| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1179 |
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| Symbol | |
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| ID | 6090518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1314163 |
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| End bp | 1315488 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641596247 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_001719930 |
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| Protein GI | 170023425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTAA CCAATTTTTC CGAACTCGAT CTCGATGAAC GTCTGATTGA CGCACTGCGC
GACAAAGGCT ATGAGCGTCC TACGGCTATC CAGGCTTCGG CGATCCCGCC GGCTATGGAT
GGGCGTGACG TATTAGGTTC GGCTCCAACA GGTACCGGCA AAACTGCCGC CTTTTTGCTG
CCAGCCTTGC AGCATTTGCT GGATTTCCCC CGCAAAAAAT CCGGGCCACC GCGGATCCTG
ATCCTGACGC CAACCCGTGA GTTAGCCATG CAAGTGGCAG ACCAAGCCCG TGAACTGGCA
AAGTATACTC AGTTGGATAT CGCCACAATA ACCGGCGGCG TGGCATATAT GAACCATGCC
GAAGTCTTCA GTGAGAATCA GGATGTTGTC GTTGCCACGA CAGGCCGCCT GCTGCAATAC
ATCAAAGAAG AAAACTTTGA TTGTCGTGCG GTAGAGACCC TGATCCTGGA TGAAGCTGAC
CGTATGCTGG ACATGGGTTT TGCCCAAGAT ATTGAAACCA TCTCAGCCGA AACCCGCTGG
CGTAAGCAAA CACTGCTGTT CTCTGCCACT CTTGAAGGTG AAGCCATCCG CGAATTTGCG
GAGCGCATTC TCAATGAGCC AGTAGAACTT GAGGCCGATC CATCGCGCCG CGAACGCAAA
AAAATTCAGC AATGGTACTA CCGGGCTGAC GACATCAAGC ATAAGACAGC GTTACTTTGT
CATCTGCTGA AACAGCCCGA TGTCTCGAAG TCCATCATTT TTGTTCGTAC CCGCGAGCGT
GTCCATGAGT TAGTCAGTTG GCTACGTGAG GCGGGCATTA ATGCCTGGTT CCTTGAAGGC
GAAATGGTAC AAGCTAAACG TACCGAAGCG GTCATTCGCT TGGGTGATGG CCGGGTAAAT
GTGCTGGTTG CCACCGATAT TGCCTCACGC GGGTTGGATA TTGATGATAT CAGCCATGTA
TTCAACTTTG ATATGCCACG CACCGCCGAT GTTTATTTAC ATCGTATTGG CCGTACTGGC
CGTGCTGGCC GCAAAGGCGT CGCCATTTCC TTGGTTGAAG CTCATGATCA TATCTTGTTA
GGCAAAATTG GCCGTTATCT TAACGAACCA CTGAAACCAC GCGTTATTGA TGAGTTGCGC
CCAACGAGCA AGGCACCAAG TGAAAAAGCG ACGGGTAAAC CCTCTAAAAA GGTTTTAGCG
AAGCGTAAAG AACAAAAAGA AGCCAGCAAA GAGAAAGTAA AGGTTAAGGT TCGTCATCGT
GATGCCAAAA ACGTTGGTAA GCGGCGTACA CCAAAAGCAA AACCTGATAC CAAGAGTGCT
GGTTAG
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| Protein sequence | MTVTNFSELD LDERLIDALR DKGYERPTAI QASAIPPAMD GRDVLGSAPT GTGKTAAFLL
PALQHLLDFP RKKSGPPRIL ILTPTRELAM QVADQARELA KYTQLDIATI TGGVAYMNHA
EVFSENQDVV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IETISAETRW
RKQTLLFSAT LEGEAIREFA ERILNEPVEL EADPSRRERK KIQQWYYRAD DIKHKTALLC
HLLKQPDVSK SIIFVRTRER VHELVSWLRE AGINAWFLEG EMVQAKRTEA VIRLGDGRVN
VLVATDIASR GLDIDDISHV FNFDMPRTAD VYLHRIGRTG RAGRKGVAIS LVEAHDHILL
GKIGRYLNEP LKPRVIDELR PTSKAPSEKA TGKPSKKVLA KRKEQKEASK EKVKVKVRHR
DAKNVGKRRT PKAKPDTKSA G
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