| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1101 |
|---|
| Symbol | dkgB |
|---|
| ID | 6089471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1241958 |
|---|
| End bp | 1242761 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641596168 |
|---|
| Product | 2,5-diketo-D-gluconate reductase B |
|---|
| Protein accession | YP_001719852 |
|---|
| Protein GI | 170023347 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATAC CTGTATTCGG ATTAGGAACT TTTCGCCTTC AAGATCAAAT TGTTATTGAT
TCAGTGAGCC AAGCTCTGAC GTTGGGCTAT CGGGCGATTG ATACAGCACA AATATATGAA
AATGAAGCGC CTGTTGGTCA GGCAATCCAA GAAAGTGGTA TTAATCGTGA TGAACTATTT
ATTACTACTA AGATCTGGAT TGCTAATTTA TCAAAGGACA AATTAATTCC CAGCCTGCGA
GAAAGCATAC AGAAACTGAA AACTGACTAT GTAGATTTAA CACTGATTCA TTGGCCATCA
CCTAATGATG AAGTTTCTGT TGCTGAATTT ATGTCCGAGT TATTAAAAGC AAAAGGGCTA
GGCTTAACTC GTCAAATTGG TATTTCTAAC TTTACTATTG ATTTAATGAA GCAGGCGATT
GCTGCCGTTG GTGCAGAAGA GATTGCAACT AATCAAATCG AGCTTTCTCC ATTATTACAA
AACCGTAATG TTGTTGATTT TGCCAAACAA AATGGCATTG CAGTGACTTC CTATATGACA
CTGGCTTATG GCAAGGCACT TGCAGAGCCA GTGATTAAAA CGATTGCTGA GCAACATGGT
GCGACCCCCG CACAAGTTAT TTTGAGTTGG GCGATGCAAT TGGGTTATGG CGTTATTCCG
TCATCGACTA AAGCTGCTAA CTTGGCCAGC AACTTACTAG CACAGAAATT ATGCCTGAAT
GCAGCAGATA TGGCGTTGAT CGCCACATTG GATCGCAATG AGAGGTTGGT CAGCCCTGAT
GGTTTAGCAC CTAAATGGGA TTAA
|
|---|
| Protein sequence | MSIPVFGLGT FRLQDQIVID SVSQALTLGY RAIDTAQIYE NEAPVGQAIQ ESGINRDELF
ITTKIWIANL SKDKLIPSLR ESIQKLKTDY VDLTLIHWPS PNDEVSVAEF MSELLKAKGL
GLTRQIGISN FTIDLMKQAI AAVGAEEIAT NQIELSPLLQ NRNVVDFAKQ NGIAVTSYMT
LAYGKALAEP VIKTIAEQHG ATPAQVILSW AMQLGYGVIP SSTKAANLAS NLLAQKLCLN
AADMALIATL DRNERLVSPD GLAPKWD
|
|---|
| |