| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1046 |
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| Symbol | |
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| ID | 6091144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1182623 |
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| End bp | 1183873 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641596109 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001719800 |
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| Protein GI | 170023295 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0326494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATT CAAATCATAA TTCTGGTCGT CGCCGTCTAT TACAAGGTGC CGCAGCAGCT
TGGATGCTGA GTATAAGCCG GGTTGGATTT GCCGCATCTT CACATATTGT TGCTGTCCGG
GTGTGGCCCT CTTCTACTTA CACCCGAGTC ACATTAGAGT CAAATACACC ACTGAAGTAC
CGCCAATTCG CCTTAACTCA TCCCGACCGT ATTGTTGTTG ATATTGAAGG CGTACAGCTA
AATAGCGTAT TGAAAGAGAT CAGCCGGCAA GTTCAATCCG CTGACCCTTA TCTCAAACAG
GCGCGGGTAG GGCAGTTCGA TAAAAATACT GTTCGTTTGG TATTGGAACT GAAGCAGAGT
ATCAGCCCTC AATTATTTAC CCTGAAACCT TTCGCTGAAT TCCGTAATCG CTTAGTGGTC
GATCTGTACC CTGCGGAGGG GGGCACATCG GCAGAAGATG ATCCGCTGCT GGCCCTATTG
GAAGATTACA ATAAAGGTAA TGTGGATCGA ACCTTGCCAC CAGAAACACC CAAAGCAGGT
AAAGCAGGGC GTGACAGACC CATTATTATC ATGTTGGACC CAGGACATGG CGGGGAAGAT
CCTGGGGCTA TCGGCAAAAA TAAAACCAAG GAAAAAGACA TTGTGCTGCA AATTGCTCGT
CGGTTACGGG TGCTGATTCA GAAAGAAGCC AATATGCGGG TGTTTATGAC TCGTAATGAA
GATGTCTTTA TCCCGCTGAA AGTTCGGGTG GCAAAAGCAC GTAAGCTTCG TGCGGATTTA
TTCATTTCGA TTCATGCCGA TGCTTTTACC AATCGGGCGG CTAGCGGCTC CTCGGTCTTT
GCTTTATCGA CCAAAGGAGC CACCAGTACT GCCGCTCGTT TTCTGGCTCA GACACAAAAT
GAGGCCGATC AGATTGGTGG GGTCAGCAAA AGTGGTGATC CTTATCTTGA CCATACCATT
ATTGATTTAT TGCAAACCGC AACTATCAAC GATAGCTTGA AGTTTGGTAA AGAAGTCCTG
AGTCGGATGA GTAAAATCAA CAAATTGCAC AAAAATCGTG TCGATCAAGC AGGATTTGCG
GTATTAAAGG CCCCTGATAT CCCGTCAATT CTGGTAGAGA CTGCGTTCAT CAGTAATTTG
GAAGAAGAGC GGAAATTACG TACCAGCCGT TTTCAGCAAC AGATAGCGGA ATCTATTTTT
GCTGGTATCA AAGCGTACTT TGCTAATGGC GGGGCAATGG CGCGATTGTG A
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| Protein sequence | MADSNHNSGR RRLLQGAAAA WMLSISRVGF AASSHIVAVR VWPSSTYTRV TLESNTPLKY
RQFALTHPDR IVVDIEGVQL NSVLKEISRQ VQSADPYLKQ ARVGQFDKNT VRLVLELKQS
ISPQLFTLKP FAEFRNRLVV DLYPAEGGTS AEDDPLLALL EDYNKGNVDR TLPPETPKAG
KAGRDRPIII MLDPGHGGED PGAIGKNKTK EKDIVLQIAR RLRVLIQKEA NMRVFMTRNE
DVFIPLKVRV AKARKLRADL FISIHADAFT NRAASGSSVF ALSTKGATST AARFLAQTQN
EADQIGGVSK SGDPYLDHTI IDLLQTATIN DSLKFGKEVL SRMSKINKLH KNRVDQAGFA
VLKAPDIPSI LVETAFISNL EEERKLRTSR FQQQIAESIF AGIKAYFANG GAMARL
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