Gene YPK_0943 details

Gene Information

• Locus tag: YPK_0943
• ID: 6090472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1060611
• End bp: 1062704
• Gene Length: 2094 bp
• Protein Length: 697 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641596006
• Product: hypothetical protein
• Protein accession: YP_001719697
• Protein GI: 170023192
• COG category: [S] Function unknown
• COG ID: [COG5484] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAA ACTCCAAGTA CTCAGATGAA TTAATAGGGA TGGCGCGTTC ATTATATTTG 
AAGCGCTGGA CACCCAAAGA AATTGCCGCA GAATTAAAAC TCAATTCAAC GCGGATAATC 
TATCATTGGG CAGATAAAAA CGGCTGGCGT GGTCTATTAA GCGAAGAGGA TTTAGAATCT 
GTTATCAACC GACGTGCGGC GGTGCTGGCT GACAAACCCA ATAAAAATGA TATCGAGTTA 
AAAGAACTTG ATAAATATAT TGATATGCAT TGCAAGCTGA TTGTTAGCCG TCACAAACAC 
ACTGAAAAAA TTCACGCCAT GAATTTAGAA GCGGCGGCGC GGGGCATTAG CGCCAGCGGG 
ACCCGTGAGG TTGGCGGCAC TATTGAAGCA ATAGCCAGCG AGGGCGAGAG CGGGAAAAAA 
CGCCGCGGCA AGCGCAATGA TATATCGGGT ATTACGCCCG ATGATTTCGC TGAATTCGTG 
GATAATTTAT TTGATTATCA ACTGACGTTA CGTGAAGCAA AAATACACCG AAACCGAATA 
TGGCTGAAAT CACGGCAAAT CGGGGCGACC TGGTACGCGG CTTTTGAAGC GCTGGAAGAT 
GCCATATTAA CGGGCAATAA CCAGGCGTTT TTGTCAGCCT CCCGCCCTCA GTCGCTGATT 
TTTCGACGCT ATATCATCAA GTTTGCGTTT GAATTGTTTG GTATTGAACT GACGGGCGAC 
CCGATCGTGC TGAGCAATGG CGCGGAATTA CACTTCTTGT CAACGAACAC TAATACGGCC 
CAGGGCTTTT GCGCCAACGT CTATATAGAC GAGATTTTCT GGCAGCGCGG GTTTACACAA 
TTAAAAAACG TGGCCGCTGC TATCGCTACA CACAGTTATC TCCGGCGTAC GTATATTTCA 
ACACCCAGCG CCAAAACACA TCAAGCCTAC CCGTTTTGGT CGGGTGATGA GTGGAGAAAG 
GGCAAAAAGG AGCGCGAGAA CGTAACATTC CCAAGCTTTG CAGAAATGCA GGGCGGCGTG 
ATGTGTCCGG ACAATCACTG GCGATTTATT ACTACGATTG AAGACGCCAT CGCCGGCGGC 
GCTCATATCC TGATGGATAT TGAGGAATTA CGGGAGGAAA ACGGAGAAAG TGCATTTAAT 
CAACTGTATA TGTGCCTGTT TGTCGATACC GGTGATTGTG TATTCCGCTT CGATCAACTA 
GAAAAATGCT TGGTCACTGT CTCAAATTGG GAAGATCACG ACGTTAATGC CGCACGGCCA 
TTCGGCAACA GGGAGGTATG GGCCGGCTAT GACCCGGCGC GTTCCGGCGA TACCGCATCT 
TTTGTCCTCG TTGCGCCGCC CCAGGCGGAC GGTGAGCCGT TCCGGGTGCT GCATATCGAG 
ACCTGGCACG GCTTTGCCTT TAAATATCAA GTGGGCCGGA TCAAGGAATA TATGGCGCGC 
TACAACATTA CCCACATCGG CATTGATAGC ACCGGCATCG GTGGGCCGGT GTGCGAGCTG 
GTGCAGGAAT TCGCGCGACG GGAAGTGACA CAAATACATT ACAGCCCGGA AAGTAAAAAC 
CGGCTTGTGA TGAAGATGAT TGATTTAGTC GAGCACAAAC GTATCGCGTG GGACATTGAA 
GATAAAAGCA TCGGGGCCTC ATTTATGGCC ATTCGTCACA CAACAACGAA AATGGGTGGC 
GCAATGACCT TTGTCGCTGA TCGCAGTGCA GACACTGGGC ACGCAGATAG ATTCTTTGCT 
ATCGCTCATG CTGTGATCAA CGAACCGATT AACAACGAAC GTAAGCGTAA ATCCGGCTGG 
GCCAAACGCT TCACAGGAAA AAATAATGAG CAAACGCAAG CAGCGCTACA GCGCCAGGCA 
GCAAAAAACC AATGTGCCAG CCATGCCGGC ACAGCGTGGC ACGTTCAGCA TCGTAACGAC 
AGATACACCG ATGCCGATTT TGACGCAGGG AACGCAGTAT CACGAAATCT GGTACGACTC 
GACCGCCGAC CACTGGCGGC AACCCATCGA CCGACTCGCG CTGGCGCAAC TTGCGAACAT 
GTGCGGGCAC CACGGCGGGG TGTTACACGC CCGCCGCAAT ATGGTTATCA GTGA 

 

Protein sequence

MAKNSKYSDE LIGMARSLYL KRWTPKEIAA ELKLNSTRII YHWADKNGWR GLLSEEDLES 
VINRRAAVLA DKPNKNDIEL KELDKYIDMH CKLIVSRHKH TEKIHAMNLE AAARGISASG 
TREVGGTIEA IASEGESGKK RRGKRNDISG ITPDDFAEFV DNLFDYQLTL REAKIHRNRI 
WLKSRQIGAT WYAAFEALED AILTGNNQAF LSASRPQSLI FRRYIIKFAF ELFGIELTGD 
PIVLSNGAEL HFLSTNTNTA QGFCANVYID EIFWQRGFTQ LKNVAAAIAT HSYLRRTYIS 
TPSAKTHQAY PFWSGDEWRK GKKERENVTF PSFAEMQGGV MCPDNHWRFI TTIEDAIAGG 
AHILMDIEEL REENGESAFN QLYMCLFVDT GDCVFRFDQL EKCLVTVSNW EDHDVNAARP 
FGNREVWAGY DPARSGDTAS FVLVAPPQAD GEPFRVLHIE TWHGFAFKYQ VGRIKEYMAR 
YNITHIGIDS TGIGGPVCEL VQEFARREVT QIHYSPESKN RLVMKMIDLV EHKRIAWDIE 
DKSIGASFMA IRHTTTKMGG AMTFVADRSA DTGHADRFFA IAHAVINEPI NNERKRKSGW 
AKRFTGKNNE QTQAALQRQA AKNQCASHAG TAWHVQHRND RYTDADFDAG NAVSRNLVRL 
DRRPLAATHR PTRAGATCEH VRAPRRGVTR PPQYGYQ