| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0932 |
|---|
| Symbol | |
|---|
| ID | 6090647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1052628 |
|---|
| End bp | 1053812 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641595995 |
|---|
| Product | putative bacteriophage protein |
|---|
| Protein accession | YP_001719686 |
|---|
| Protein GI | 170023181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.374954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC GCCCCGACCC GGACTATAAA GCCATTCTTG CTGACGAGGG GTTGCCTGTC
ACTGAAACGC AGATACGCGC TGAGTTTGCA GCGATTGTCG CGGATGAAAA TTTAGTGACT
AACACGTCAC AAATGTCGCC ATTCTGGCGT TTGATCACTG CTCTTGTCAT CGCCCCGGCG
CTATGGCTGG TCAATATTCT GACGGGTGCT GTCATTGCAA ATATGTTTCT TGCGACAGCC
AACGGCACGT TTATTGATTT GTTTGCTTGG GCAGTTAACT TATCACGCAA AGAAGCCAGC
ACCGCGCAGG GCCTGATCCG TTTTACTAAA AACACGGTCA GTGCAGTAAT CACAGTACCC
GCCGGAACGG TCATTCAGAC TGAGCGTATC AACGGCACTG TCTACAAATT AATGACCGTG
GACGATGCAG TTATCGCCGC CGGGGTCATT AGTGCGTTAG TTCCTGTTAA TGCCGAGTCC
GCCGGCAGCG GCCACAATTT GGCTCCCGGC TATTTTCGGA TCATGCCCGT CGCCGTCGGC
GGTATCGCCA GCGCAGTGAA TGAAGAAGAG TGGTTAATTG CGCCGGGCGC AGATAAAGAG
CGGGATAACG ACTTGCGTGA CCGGGTCAGA AATCAGTTTA ATTTGCCGGG CCAATATCAC
ATTGATGCTG TTTACCGTGG ACTGATTGCC GGCATTGCCG GCCTGACCAC CGACCGGATA
TTTTTCTTGC ACGATGCCCC GCGCGGCCCT GGCACTGCCA ACGTCTACTT GTTGTTGGAT
TCTGGCATTG CGAGTCAGCC GTTTATCGAC ACAGTGAATG AGTATGTCAT GACGCAAGGC
AATCACGGCC ACGGCGACGA TGTGTTGTGT CTGCCGCTGC CAGAAGTGAT TTATGACCTT
GTTGTGACGT TACATCTCTT CGAGAGCAGC AACTTAGATG ACGAGCAAAC CGACGCATTG
TTGGCAAATG TTCGCAACGT GATCGGCTGT GCATTTCGCG AAAACACAGA TTATGAAGTA
CAAAAGACCT GGCCTTACAG CCGATATTCT TTCTCGCGTT TGGCTGAAGA ATTACATGCA
AATTTTGCTG AAATTGAGTC ACTGACATTT TCCCAGGGCG ACATTGTCAG TGGGCTATCT
GTCCCCCGCC TGGGCGTACT AACACTGGAG AAAGCGAATG GATAA
|
|---|
| Protein sequence | MNNRPDPDYK AILADEGLPV TETQIRAEFA AIVADENLVT NTSQMSPFWR LITALVIAPA
LWLVNILTGA VIANMFLATA NGTFIDLFAW AVNLSRKEAS TAQGLIRFTK NTVSAVITVP
AGTVIQTERI NGTVYKLMTV DDAVIAAGVI SALVPVNAES AGSGHNLAPG YFRIMPVAVG
GIASAVNEEE WLIAPGADKE RDNDLRDRVR NQFNLPGQYH IDAVYRGLIA GIAGLTTDRI
FFLHDAPRGP GTANVYLLLD SGIASQPFID TVNEYVMTQG NHGHGDDVLC LPLPEVIYDL
VVTLHLFESS NLDDEQTDAL LANVRNVIGC AFRENTDYEV QKTWPYSRYS FSRLAEELHA
NFAEIESLTF SQGDIVSGLS VPRLGVLTLE KANG
|
|---|
| |