Gene YPK_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0912 
Symbol 
ID6089614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1030567 
End bp1031751 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content52% 
IMG OID641595974 
Productputative phage gene 
Protein accessionYP_001719666 
Protein GI170023161 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA AGCCTGAAAT AGATTATGAA CAGGTATTAA AAGACAGTGG GATGCCGACC 
ACTGAAACAG ATATTCGGCT GAAATTTGAC GAGCTGGTCG CGGCAGAGGG GTTAGTGACC
AATACCTCCG ATATGTCCCC GTTCTGGCGG CTGATAAAAA CCCTTGTCAC CCGCCCGGTG
CTGTGGCTCA AAGAGGTGCT AATCAATACC GTGCTGGCCA ATATGTATCT GGCCACCGCC
AGTGGCACAT TTTTAGAGGT ATTTGGCTGG GGCGTGAATA CCAGCCGTAA GCCGCCTACC
GCCGCCATCG GCATGATCCG CTTCTATAAA GCTGATATTC AGCAAGATGT GGTTATTCCA
GCCGGGACGA TTATTCAGAC CGAGCGTATT AACGGCAAAA TTTACAGCGT GGTGGTCAGT
GTTGAAACCG CCATTGCTGC CGGTAGCGCC AGTGGGTTGG TCGCGGTGAA CGCCGCTGAG
GTGGGCGGGG CGTTTAATCT GGCTCCCGGC TATTACCGTA TCTTGCCGCA GGCAGTGCCA
GGCATTGAAC GGGCGCAAAG CGAGGGCGAT TGGTTAACGG TGCCGGGTGC TGATAAAGAG
TCAGATGATG ATTTTCGTGA ACGCTGCCGC AATCAATTTA ACTTGGTCGG CAGCTATCAC
ACTGATGCGG TGTACCGCAG CATGATAGCC GGGGTAGTCG GGTTGTCGAT TGACCGGATT
TATTTCTTGC ACGATGCCCC ACGTGGGCCG GGTACCGCCA ACGCCTATTT ACTGTTGGAC
AGCGGCGAGA TCTCCCAGCC GTTTATAGAT GCGGTCAATG ACCATATTAC CGTGCAAGGC
CACCATGGAC ACGGTGATGA TATGCAGTGT CTGCGGTTGC CGGAAAGCCA GCATGATTTA
GTGGTGACAC TGTATGTCAG TAACAAACAG AACTTAACCG CTGATGAGCT GGCGGGGCTG
GAAAGCGGCT GTGAAAACCT TGTGCGCTGT GCTTTTCGTC AGAACAGCAA TTACACGGTA
CTTAAAACGT GGCCCTATTC CCGTTTCTCA TTTTCCAATC TGGCGCGGGA GCTGCACAAG
ACGTTTTCAC TGATTGAGTC ATTGAGTTTT TCACTGACGG ACATTGTGAG TGAACTCAGT
GTGCCGCGCC TGAACAGCGT AACGGTGGTA ATTGAAAATG CCTGA
 
Protein sequence
MSNKPEIDYE QVLKDSGMPT TETDIRLKFD ELVAAEGLVT NTSDMSPFWR LIKTLVTRPV 
LWLKEVLINT VLANMYLATA SGTFLEVFGW GVNTSRKPPT AAIGMIRFYK ADIQQDVVIP
AGTIIQTERI NGKIYSVVVS VETAIAAGSA SGLVAVNAAE VGGAFNLAPG YYRILPQAVP
GIERAQSEGD WLTVPGADKE SDDDFRERCR NQFNLVGSYH TDAVYRSMIA GVVGLSIDRI
YFLHDAPRGP GTANAYLLLD SGEISQPFID AVNDHITVQG HHGHGDDMQC LRLPESQHDL
VVTLYVSNKQ NLTADELAGL ESGCENLVRC AFRQNSNYTV LKTWPYSRFS FSNLARELHK
TFSLIESLSF SLTDIVSELS VPRLNSVTVV IENA