| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0896 |
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| Symbol | |
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| ID | 6087358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1017736 |
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| End bp | 1018761 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595958 |
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| Product | PBSX family phage portal protein |
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| Protein accession | YP_001719650 |
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| Protein GI | 170023145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.647751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AGAAACAGTA CCGCCGCGCC CCAGTGCCCC ATACCGCCCG CAACATGAGC
ATTATCAGTT TGGGCAAACC CGAACCGGTT TTAACCACCG GCACCGATTA TCAAGACATC
TGGTATGACA GTGACTTTGA CCACTACAGC CAACCCATTG ACCGGCTGGC CCTTGCCCAA
CTGGTTAATC TCAATGGCCA GCACGGCGGC GTTCTCTATG CCCGGCGCAA TATGGTGGCC
GCTGACTATG TCGGTGGCGG CCTGACCCAT GAGGAACTAA AAGCCGGGGT ATTCGATTAT
CTGACCTTTG GTGATGTGGC CATTGCGAAA GTGCGTAACG GCTGGGGTGA AGTGGTGGCA
CTGGCTCCGC TGCCCTCGCT TTATTTGCGG GTGCGTAAAG ACGACAGCAT CGTAATTTTG
CAGAAAGGGG AACCGCTGGT TTATGGCCAG GAGGATGTGG TTTACCTCAA ACAGTATGAC
CCGCAACAGC AGGTGTATGG CCTGCCGGAT TATATCGGCG GGATTCATGC CGCTTTACTC
AACTCCGAGG CCACCATTTT TCGCCGCCGT TACTATCACA ACGGGGCGCA CACCGGCGGG
ATTATCTACA CCAATGACCC AAATCTCAGC ACCGAAGTGG AAGACGAGAT TATAAAAAGT
CTGGAACAGA GCAAGGGGAT CGGCAATTTC AGCACCTTGT TTGTCAACAT TCCGAAAGGC
GACCCGGAAG GGATTAAATT TATTCCGATT GGCGATATCA GCGCCAAAGA TGAATTTGCC
AATATCAAGA ATATCAGTGC GCAGGATATT TTGACCGCTC ACCGTTACCC GGCAGGGCTG
GCGGGCATTA TTCCCAGCAA TAGCGCGGGA TTGGGTGACC CGGAAAAGGC GCGGGCAACC
TACCGCAAAG ATGAAGTTAT TCCGCTGCAA CGCATGATTA TGGACGCTAT CAACAGCGAC
CCACAGATCC CGGCGCATTT ACACATTAAA TTCGACATTG AAGATACACA ATCGGGTGCG
TCATGA
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| Protein sequence | MKKKKQYRRA PVPHTARNMS IISLGKPEPV LTTGTDYQDI WYDSDFDHYS QPIDRLALAQ
LVNLNGQHGG VLYARRNMVA ADYVGGGLTH EELKAGVFDY LTFGDVAIAK VRNGWGEVVA
LAPLPSLYLR VRKDDSIVIL QKGEPLVYGQ EDVVYLKQYD PQQQVYGLPD YIGGIHAALL
NSEATIFRRR YYHNGAHTGG IIYTNDPNLS TEVEDEIIKS LEQSKGIGNF STLFVNIPKG
DPEGIKFIPI GDISAKDEFA NIKNISAQDI LTAHRYPAGL AGIIPSNSAG LGDPEKARAT
YRKDEVIPLQ RMIMDAINSD PQIPAHLHIK FDIEDTQSGA S
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