Gene YPK_0883 details

Gene Information

• Locus tag: YPK_0883
• ID: 6090491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 1009883
• End bp: 1010446
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641595945
• Product: CI repressor
• Protein accession: YP_001719637
• Protein GI: 170023132

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTTTG AGAAAGGCGG TCAAGAAGTC ATTAAGCGGA TGTTAGAAGC CTACGGATTT 
AGTACTAGGC AAGCACTCTG CAACCAGCTA GGGGTTTCAA AAAGCACCAT GGCTACACGC 
TTCATGCGAG ATATATTTCC TGCTGACTGG ATTATTCAAT GTGTTATGGA TACAGGGGTA 
AATATTGAAT GGCTAGCCTC TGGCACAGGC GTAATGTTCA ATAATGTAAT CAATGATGTT 
GTTAAAGTTC CAAGAATCAA ACTCATTAAT GGCAATCAAC AGCCAGCCAA TCATTTATTT 
TTAGACAAAG TAATGATGAA AAGTGATCTA GCTAAGCCAG CAATAATAGA TGATGGTATT 
AACTCATACC TTGTTGATCT AGAAACAGAA ATTTTATCTG ACGGCATTTG GCTAATAGAT 
ATTGATGGGA AGTCAAGCAT TAGGAAGATC CAACAATTAC CCGGACATAA ATTACGAGTG 
TCAAATGAAG AATTAACTTT CGATTGCAAG GTTGAAGATG TACGTTTTAT TGCAAAAGTA 
GATACGATTT TTCAAAAAGT TTAA 

 

Protein sequence

MDFEKGGQEV IKRMLEAYGF STRQALCNQL GVSKSTMATR FMRDIFPADW IIQCVMDTGV 
NIEWLASGTG VMFNNVINDV VKVPRIKLIN GNQQPANHLF LDKVMMKSDL AKPAIIDDGI 
NSYLVDLETE ILSDGIWLID IDGKSSIRKI QQLPGHKLRV SNEELTFDCK VEDVRFIAKV 
DTIFQKV