| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0882 |
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| Symbol | |
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| ID | 6089921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1008807 |
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| End bp | 1009748 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641595944 |
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| Product | integrase family protein |
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| Protein accession | YP_001719636 |
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| Protein GI | 170023131 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATATG AGCAATTCAT TATGAATGAA TCTGCAAATA AGCCTTGGAT GGGTGATAAA
CCAGATACCC GATGCCTAAA AGAATTAACT GACCTATGGT TTGCTTTACA TGGACGCTCA
CTTTCCTCTG GAGATAAGAT TCACAGCAAA CTGAGATTGG TTGCAGATGC ATTAGGTGAT
CCAATAGCTG TAAATTTCAC GGCAAAGGAC TTCGCCCATT ACCGCAACAA AAGACTGACA
GGTGAAATAA AACTAGATGA GCGCTTTGTT AAAGGCTCTA GCCCTGTAAC CATAAATCTA
GACCATTCAT ATCTCAGCGC TATGTTTGAA GAATTGATAC GTTTGGAAGA ATGGAAATTA
CCTAATCCGC TTGAAAAATT GCGTAAATTT ACGATTAGTG AAAGAGAAAT GGCGTGGCTT
GACATTGATC AGATTAATGA GCTTTTGGCG GCTACAAGTC ATCATATTGA TATGAATCGT
GTTATCCGGG TTTGTCTATG TACCGGGGCG CGCTGGAGTG AGTCACAGTT TTTAACAAAG
AATCAATTAA GCCCAAACAA AATTACCTTT ACTAAAACCA AGGGCAAAAA AAATAGAACG
GTACCTATTT CTGCTGATTT TTATGAAGAG CTGAAAGAGA TTAAAAGTGA GCGGTTATTT
GGTGACTGTT ACTACCCTTT CTTAACCATT TTGAATAACT CATCAATTGT TTTACCAAAA
GGGCAGTTAA CACATGTTCT CAGACACTCA TTTGCGGCGC ATTTTATGAT GAATGGCGGC
AACATTTTGG TACTTCAAAA GATACTCGGA CATCATGATA TAAACATGAC TATGCGTTAT
GCCCATTTCG CACCTGAGCA TTTAGATACA GCAGTAACGT TTAACCCCCT CGCCATGGTA
AATAATGGCG GCAAATTGGC GGCAAAAAAT GGTACTCACT AG
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| Protein sequence | MAYEQFIMNE SANKPWMGDK PDTRCLKELT DLWFALHGRS LSSGDKIHSK LRLVADALGD
PIAVNFTAKD FAHYRNKRLT GEIKLDERFV KGSSPVTINL DHSYLSAMFE ELIRLEEWKL
PNPLEKLRKF TISEREMAWL DIDQINELLA ATSHHIDMNR VIRVCLCTGA RWSESQFLTK
NQLSPNKITF TKTKGKKNRT VPISADFYEE LKEIKSERLF GDCYYPFLTI LNNSSIVLPK
GQLTHVLRHS FAAHFMMNGG NILVLQKILG HHDINMTMRY AHFAPEHLDT AVTFNPLAMV
NNGGKLAAKN GTH
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