| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0800 |
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| Symbol | |
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| ID | 6090171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 908889 |
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| End bp | 910241 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641595861 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001719554 |
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| Protein GI | 170023049 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG AACGCCCTCT GTGGGCTCGC GGGATCCTGG TGTCTCCGCA ACAATTTCAA
CAACAGGCTT CCTGGGAGGC CTGGACCAAT GAATGCATTG CGCAAATGGC CGTGATGCAT
CCCTGGGGCG TGCTTCAGGC CACTTTTGAA TTGGATGCAT TGGCACAGGG CCGCCTGAAA
GCGGCGCGTT TGCATGTGCG TTTTCAGGAC GGTGTGCTGG TGGATACCGA GTGTGCTGAT
GTGCTGCCGC CCACGCTGAC GCTGGCCGCC AGTCTGCCCG CCGAGGCCAG CGACGCCACG
GTGATGCTGG CGATACCACA ACTGTATGCC AATGGCGGTA ACTGCCTGCA GCCGGATGAG
CGGGGCGAAC GCCCGGTACG CCATCGTCAG GCCTGGCGCG ATGTCCAAAA TCAGTTCGGC
GATGACAAAA AGCAGGTCGC GGTGATGTAC CACCAACTGA CCCTGCGGCT GGACACTCAG
GAAAACGGCG ATTATCAGGT CTGCCCGGTG GCGCGTTTGC TGCGGGATGC GCAAGGTCGC
TGGACACTGG ATCCGGGCTT TATTCCGCCG ATGCTGAGCC TGCAGGCCAG TGCCTGGTGT
GGCGAACAGC TTGAGTTATT GATGGTGCAA CTGCGGGCGC GTTTGCAGCG TCTGATGGGG
ATGCGCCGGG AGAGCAATGC ACGGATGGCC GATTTTGCTG TTGCGGATGT GTCGCTGTTC
TGGCTGCTCA ATGCCCTTAA CAGTGCCGAA CCGGTATTGG GGAATTTTCA GCGCTATCCG
CAGGTTCATC CAGAGCGCCT GTATCAGGAA CTGGCCAGGC TGGCGGGCAG CCTGCTGACG
TTCTCCCTTG AGCACGAAGT GACGGCGATC CCGGTTTATC AGCATGAACA ACTGACCCGC
GTCTTTCCCC CGTTGTTTGC CCTGCTGAAT ATTCTGCTGG AAGCCAGCCT CCCTTCACGG
GTAGTGGCGA TTGAGCTGGT TCATGAACCG CGTATCAATC AGTGGCGCGC GACCCTGCGT
GACCCTCGTC TGCGCGAAGG GGCCGATTTC TACCTGTCGG TCCGTTCCTC GTTGCCCGCG
GCCCAATTGC AGACTCAGTT CCCGCAGTTG TGTAAAGCCG GTGCGCCGGA TGAGGTCGGT
AACGTGGTGA ATGTTGCGCT GAGTGGCATC CCACTGCGTC CGCTGAGCCA TGTCCCAGCC
GCCATCCCCT TGCGGCTGGA AAACCAGTAT TTCTCCCTTG ATCTCAGCCA CCCTGCGGCG
ACGCAGATGA TGGAGACGGG GGCCTGTGTG TTCTATGTAC CCGGTACGCT GGGTGAGATC
CAACTGGAGC TGTTTGCGGT GCTACGCGCA TGA
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| Protein sequence | MKIERPLWAR GILVSPQQFQ QQASWEAWTN ECIAQMAVMH PWGVLQATFE LDALAQGRLK
AARLHVRFQD GVLVDTECAD VLPPTLTLAA SLPAEASDAT VMLAIPQLYA NGGNCLQPDE
RGERPVRHRQ AWRDVQNQFG DDKKQVAVMY HQLTLRLDTQ ENGDYQVCPV ARLLRDAQGR
WTLDPGFIPP MLSLQASAWC GEQLELLMVQ LRARLQRLMG MRRESNARMA DFAVADVSLF
WLLNALNSAE PVLGNFQRYP QVHPERLYQE LARLAGSLLT FSLEHEVTAI PVYQHEQLTR
VFPPLFALLN ILLEASLPSR VVAIELVHEP RINQWRATLR DPRLREGADF YLSVRSSLPA
AQLQTQFPQL CKAGAPDEVG NVVNVALSGI PLRPLSHVPA AIPLRLENQY FSLDLSHPAA
TQMMETGACV FYVPGTLGEI QLELFAVLRA
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