Gene YPK_0793 details

Gene Information

• Locus tag: YPK_0793
• ID: 6089601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 903021
• End bp: 903671
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641595854
• Product: abortive infection protein
• Protein accession: YP_001719547
• Protein GI: 170023042

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGGAA AGATTGACCG GGTTACTCAT GCCCTGACTT GTGTTTCTGT TTGGATAGGA 
TGGTTTGCAC TTTCATTTTC CCTGCTGCTG TTTCCTGGCT ATGTGGGAAT ATATCGCTCA 
GGTATGGCGA CTCCTCTGCT GTACATCGTT TTCTGGCTCC CCTTTACGCT ACTGGCGTGG 
AAGCATTATC AGAAGTCGTT TGGACTGATG CCGTTGGGAA GAATAACCTT GCAGGATATG 
CTGATTCCGG GCCTTGCTTT GCTGGGATTA ACCGCTATTT TTCAGTTTTT CGGCCAGCCG 
GAACCCTGGG TGGAAAGCCT ATTACAGCCA TCAACTTTCA CTCAAATTTT GCTGGTGATA 
ACCATTTGCG TGTTTGCTCC GATTTCGGAG GAGATTATCT TTCGTGGGTT CTTACTGAAT 
GCGGGAATTG GTTTTGGTCG CAGAGGGCGG TTGCTGGCGG TAGTGATCAC CTCGCTGTTG 
TTCGCTCTGG TACACACTCA ATATCTCTAT CCGGCGACGT TTGTTTCGCT ATTCGTTTTT 
TCTGCGATCC TGTGTGAGGT CAGAATCAGA ACTGGTAGCC TACTGATGCC GATGGTGCTT 
CATTCTGCGA ACAATATAGC CTCCGTAGCT TGGGTGCTGA CGTTGAGTTA A 

 

Protein sequence

MNGKIDRVTH ALTCVSVWIG WFALSFSLLL FPGYVGIYRS GMATPLLYIV FWLPFTLLAW 
KHYQKSFGLM PLGRITLQDM LIPGLALLGL TAIFQFFGQP EPWVESLLQP STFTQILLVI 
TICVFAPISE EIIFRGFLLN AGIGFGRRGR LLAVVITSLL FALVHTQYLY PATFVSLFVF 
SAILCEVRIR TGSLLMPMVL HSANNIASVA WVLTLS