Gene YPK_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0790 
Symbol 
ID6090914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp898556 
End bp899914 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content50% 
IMG OID641595851 
Producthypothetical protein 
Protein accessionYP_001719544 
Protein GI170023039 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACAC GCCGGAAATT TTTGATGATG AGTGCCGGAG CAGGTCTTTT ACTCTCTGTA 
CCCATGTTGG CTCGAACCGG TGTTCAGCCT GCACAAGCTG CTACCGCCAT TACGCAAGTT
TTTGGTGACG GGATCCGGCT AACCGCTGTT GCGGTCGAAT ATCCGACAGA AGTCAGCGCT
GAAGGGCTAA ACCCCGCCGA CTTTCATGTT GAAGGGCGAA CAGTAACCGG TGTATGGACC
AGCACTTCTA CTAATCCGGC AGATATAGCG CCCTCAGGAC GCTATATGAT TATAGCGCTG
TCACCTGATG ACAAGAATGC AACGCTGGCC GAACAGGTGC AGCCAAATAG TAAAAACAAC
AGCAACAAAT CTGCCAATGG AAGAGGCGGC CCCGGTAATG CAGGCGATAT TCCTGCCTAT
GATACGGTTT ACCGGACAGC TCAAGCCACG GTACTGCGCC TTCCGTCAGT TCATACCGCC
AGTGGTGATA CGCTTCCCGC TAGCGAGAAA GCGTTGACAA CCCAATATGT GGAAAACTTG
ATCGTTGATG ATTTTCAGCA GCTTGAGTTT TATGATGAAA AAACAGGTAA AAAGCTGAAA
TACAACCTTT TCATCCCCAA AGACTATAGC CCTGATAAAA ACTATAGCCC TGATAAGGCT
TGGCCGCTGG TGTTATTCAT GCATGATGCT GGCGCCACCA GCGATGTTAC ACGCACCACC
CTGTATCAAG GCTTAGGCGC TATTGCTTGG GCAAGCCCAG AAGATCAGGC ACAGCGCCCC
TGCTTTGTTC TTGCACCTCA GTATGAAGAA ATCATTGCCG ATGATGACTC AAAAACATCT
GACATGCTGG ACACCACCAT TGATCTTATC AATGTACTTT CAGAGCAGTA CAACATTGAT
AAGAGCCGTA TCTATGCCAC AGGGCAGTCG GGTGGATGCA TGATGACGAT AGCGATGAAC
ATCAAGTATC CGGATTTCTT CGCGGCCTCT TTTTTGGTTG CGGGTCAGTG GGATCCCGCG
CTGGTGAAAC CTCTTGCCCA GCAAAAACTC TGGATTCTGG TTTCTCAGGA CGATAACAAA
GCCTGGCCAG GTCAGAATGC CATCATTGAT GTTCTGGAAA AAGAGGGTGT CCAAATCAGC
CGTGCAATAT GGGACGGAAC ATGGAATGAA GAGCAATTTC GTCAGGCTTT TGAACAAATA
GAGGCAGAAA AAAGCCCGAT TAACTATGTG GCATTTCGTG AAGGCACCGT GATTCCTGAG
GGGCAATCCA CCGAAGGTGC CAGCGGGCAT CGCAATACCT GGCGAATTGC CTATACCATC
TCCCCCATAC GCGAATGGAT TTTCAGGCAA CAGCGCTAG
 
Protein sequence
MLTRRKFLMM SAGAGLLLSV PMLARTGVQP AQAATAITQV FGDGIRLTAV AVEYPTEVSA 
EGLNPADFHV EGRTVTGVWT STSTNPADIA PSGRYMIIAL SPDDKNATLA EQVQPNSKNN
SNKSANGRGG PGNAGDIPAY DTVYRTAQAT VLRLPSVHTA SGDTLPASEK ALTTQYVENL
IVDDFQQLEF YDEKTGKKLK YNLFIPKDYS PDKNYSPDKA WPLVLFMHDA GATSDVTRTT
LYQGLGAIAW ASPEDQAQRP CFVLAPQYEE IIADDDSKTS DMLDTTIDLI NVLSEQYNID
KSRIYATGQS GGCMMTIAMN IKYPDFFAAS FLVAGQWDPA LVKPLAQQKL WILVSQDDNK
AWPGQNAIID VLEKEGVQIS RAIWDGTWNE EQFRQAFEQI EAEKSPINYV AFREGTVIPE
GQSTEGASGH RNTWRIAYTI SPIREWIFRQ QR