| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0738 |
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| Symbol | |
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| ID | 6090593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 796508 |
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| End bp | 797800 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595799 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001719492 |
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| Protein GI | 170022987 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAC TGAATTGGGT TCGGTCCACG CCAATTTTTT ACGTGCCGCG AACCCTACGC
TCTCGGCTAA TCTTACGCTC TCCGCGAATG GGGCCTTTGC GGGCAAAGCA ACACCGCCAT
TCTTTACTGT CCCATGCGCT TTTTCTGCTC ATACTCGGGG CGGGCTCTGT GAGTGCGGCC
CCCGCGCCTT TACCTGCCGT AACCGTCGCG GTAGTCGCGT CAATAACACC AGACAATGCC
GTGCAATATC TTGGGCGGAT TGAGGCGATT CAAGCGGTTG ATGTGACTAC CCGCACCGAA
GGATTTATCG CCCGCCGTCT GTTTACTGAA GGGAAAATGG TCAAGCAGGG GGAACTGTTA
TATGAAATTG ATCCCGCTTT GCATCAAGCA TCGGTGGCGC AAGCACAGGC GCAACTCGAC
AGCGCGACTG CCAGCGCCAA TCATGCACAG GTGAACCTCA CGCGTTTACA ACGCTTGGGT
AATAACCGTT CTGTCAGCCA GGCGGAGGTG GATGAAGCAC AGGCACAGCG AGATATCAGC
CGGGCAGCGG TGGCGCAGGC GCAGGCTAAC CTACAGATTC AGCAGTTACA GCTCAGCTTC
ACCCAAATTC ATGCGCCAAT CAGTGGGCAA ATGGGTCACA GCCGTTTTAA TGTGGGCAGC
CTGATTAATC CCGCTAGCGG CACCTTGGTC AATATTGTGC AGCTCGATCC GATTCGGGTG
GCGATTGCCG TCAATGAACG GGATTACATT ACCGCGACCT ATCAACGCGC TGTCGCCCGT
GAAAAAACCA CTGAAAATCC CTTGCTCCTT CTGGGGCGTT TTACCCCTCG CATTCAACTG
GCAAATGGTA AGCAATATCC AGAGAGTGGT ATTTTTGAAT CGGTGGATAA CCAAATTGAT
AAGCAGACGG GAACGGTCAT TATCCGTACT CGTTTTGCCA ACCCTCGCCA TTTGTTGCTG
CCCGGTGGCG TAGTCAATGT GTCATTGGCT GCAGACGACG CCAAACCTGT GACGGTCATC
CCGATTGCTG CTTTACAACA GAATAAACAG GGCCATTTTG TGCTGGTAGT GACCGATAAA
GCGGTGGTCG AAGTGCGCCC AGTGACCCTA GGTGAACAGT TCGAACAGCA ATATGCGGTG
ACCGATGGGG TGAAGGTGGG TGAAAAAGTC ATTGTGGCGG GGCTACAGCA TGTCCGACCG
GGTATGGCGG TGAACGCCAG CACGGTTAAT GATGGAACTG TAAATGATGG AACTGTAAAT
GATCGCGTTG CAGCGCCATT GACGGCTAAT TAA
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| Protein sequence | MFTLNWVRST PIFYVPRTLR SRLILRSPRM GPLRAKQHRH SLLSHALFLL ILGAGSVSAA
PAPLPAVTVA VVASITPDNA VQYLGRIEAI QAVDVTTRTE GFIARRLFTE GKMVKQGELL
YEIDPALHQA SVAQAQAQLD SATASANHAQ VNLTRLQRLG NNRSVSQAEV DEAQAQRDIS
RAAVAQAQAN LQIQQLQLSF TQIHAPISGQ MGHSRFNVGS LINPASGTLV NIVQLDPIRV
AIAVNERDYI TATYQRAVAR EKTTENPLLL LGRFTPRIQL ANGKQYPESG IFESVDNQID
KQTGTVIIRT RFANPRHLLL PGGVVNVSLA ADDAKPVTVI PIAALQQNKQ GHFVLVVTDK
AVVEVRPVTL GEQFEQQYAV TDGVKVGEKV IVAGLQHVRP GMAVNASTVN DGTVNDGTVN
DRVAAPLTAN
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