Gene YPK_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0689 
Symbol 
ID6088295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp748971 
End bp749558 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content45% 
IMG OID641595750 
Productputative transcriptional regulator, CadC 
Protein accessionYP_001719443 
Protein GI170022938 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA ATGAGATTGT GTTTAAATTA GAAGGCGCGG TGCTATTCTC TCCGGAAAAA 
CGCTGCTTAA GCGGGCCCGG TGGAACAGTG GCGGTATTAA CCGAAAATAA TCTTAGATTT 
TTACAACTCT TGCTTAATGG TGTCACAGAG AAAGAAGAGA TTATCAACGA GGTGTGGAAA 
GAGCAACGAG GGGCTATCAG TGAGAGCAGC TACTATGGGC AATTGTATAT GCTGCGTAAA 
GCCTTCTTAC AGGTCGGCCT AAAAGAATCG CTGATACACA CCATCCCCCG TAAAGGGGTG 
CGCTATACCG GGTCGATTAG CCAGATAGCG ATAAATAGCA GCCCAGAAAA TCGACAGAGT 
AGTGAAACTA CTAATCCCGT TTCGATGATG CACGATCCTG CTCTGTTGGC GGTAGCGCCC 
ATACCCACAG ATGCCGGAAC AATGACATTC TCCTCTCCAC TCACTAAGCA AAGTTTTTTA 
CACAGCCACC GTTGGAAAAA AATGATCTCA TTATTGGCGT TTTTTTCGTT CTGTTGGCTC 
TCATTTCTCT CAGCTTTAGT CATTATTATC TTATTAAAGG GAGAGTGA
 
Protein sequence
MEKNEIVFKL EGAVLFSPEK RCLSGPGGTV AVLTENNLRF LQLLLNGVTE KEEIINEVWK 
EQRGAISESS YYGQLYMLRK AFLQVGLKES LIHTIPRKGV RYTGSISQIA INSSPENRQS 
SETTNPVSMM HDPALLAVAP IPTDAGTMTF SSPLTKQSFL HSHRWKKMIS LLAFFSFCWL 
SFLSALVIII LLKGE