| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0685 |
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| Symbol | |
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| ID | 6088448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 745816 |
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| End bp | 747087 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641595746 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001719439 |
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| Protein GI | 170022934 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTATTG TTATTCTCTA TTTTTTGTTT GAAAATTCAG CTAACGCCAA GCAAATTTAT
CTGCCTATTG GTGGTTCACA CATTATAAAA ATGCAGGAAG AGATCGACAC TGTCTTTGTT
TCTGCTGCAA AAACAGCTGA CTATGAAATA GTTGATAATA ACAGTGTGAT TATTTATGCC
AAAAAAGAAG GCTTGGCTGA ATTCACTTTG TTCAATAAAA ATCATCAGCC GATAAGTAAA
ACACGAGTGC TGGTGAATAA TACTATCAAT GATGCCTATC GAAGAATACG TACAGAGTTT
CCTGATAGTA AGATAGAAAT AAATAAAATA GGCGAAAGCT ACATACTTAC GGGCAGTGCC
GAAACCGAGG AAGCAAAAGA TACCATTGCC AATATTGTCG GCGAGGCGAC TGCAAGTAAA
AAAGAAAAAG AGAGAGAAGA GCATTATCAA AGCAGCCCTG AATATCGGGG TGTTATTAAT
AAAATTAAAT TACCTCAAGC CAATCAAGTT AATGTAAAGC TCACTATTGT CGAAATAACG
AAAGATTTTA CTGAAAACAT AGGGCTAGAT TGGAATTCGA TAAAAAGTGC GGCAGGCGCT
TTTCAGTTTT TAAATTTTAA TGCACAAAGC ATCAGCACAT TAGTCCATGC TATTAATGAT
GAGGCGATAG CCAAAGTGTT GGCAGAACCA AATCTATCAG TCTTATCCGG TGAATATGCC
TCCTTCTTGG TCGGCGGTGA GATACCGATT GTTAGCACCA ATCAGAATGG TATTAGTGTC
GAATATAAAG AGTTTGGCAT TAAGTTAAAC ATTGGTGCCA AAGTGAATGA GAAGAAACGT
ATTCGTGTCA TGTTAGGTGA AGAGGTCAGC AGTATCGATA AAGTATTTAA TCTTAGAGGT
GGGGACTCCT ACCCTTCATT ACGCATACGT AAGGCAAATA CCACAGTAGA GTTAGGCGAT
GGTGAAAGTT TTATTCTCGG TGGCCTGATC AGTAGTACTG AACGGGAGTC GCTTAAAAAA
ATTCCGTTTA TTGGTGATGT CCCCCTACTG GGTGCGTTAT TCCGTAATGC ACAAACTCAG
AGGAATCAGA GTGAGCTGGT GGTTGTCGCT ACCGTAAACC TAGTGAAACC CGTATCAGCA
AGGCAGATTG AGCTACCCGA TTTTATGCAT ACCTCTACGA TAGAACGTTT TTTCAATCTG
ACCAATATCA AAGACGCTAA GCGTAGAAAG CAGGCGAAAG ATTTTCTGCA AAAAGGAGGT
TTTATAAAAT GA
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| Protein sequence | MSIVILYFLF ENSANAKQIY LPIGGSHIIK MQEEIDTVFV SAAKTADYEI VDNNSVIIYA
KKEGLAEFTL FNKNHQPISK TRVLVNNTIN DAYRRIRTEF PDSKIEINKI GESYILTGSA
ETEEAKDTIA NIVGEATASK KEKEREEHYQ SSPEYRGVIN KIKLPQANQV NVKLTIVEIT
KDFTENIGLD WNSIKSAAGA FQFLNFNAQS ISTLVHAIND EAIAKVLAEP NLSVLSGEYA
SFLVGGEIPI VSTNQNGISV EYKEFGIKLN IGAKVNEKKR IRVMLGEEVS SIDKVFNLRG
GDSYPSLRIR KANTTVELGD GESFILGGLI SSTERESLKK IPFIGDVPLL GALFRNAQTQ
RNQSELVVVA TVNLVKPVSA RQIELPDFMH TSTIERFFNL TNIKDAKRRK QAKDFLQKGG
FIK
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