| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0680 |
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| Symbol | |
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| ID | 6090538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 741391 |
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| End bp | 742224 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641595741 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001719434 |
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| Protein GI | 170022929 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.532814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTA TTTTCTTCAC GTTATTAATA CTATTTGGTT TGATTATCAT ATTAAAAGTC
AACTCACGTT CAAGAAGAAT ATCAATTTAT AATAAAATAA ATTCGCGTGA AAACAAAAGC
AAAGAGACAA ATAATGACAC AAAAGATAAA CCGACCGTAC TGTCTGATTT TATAAAGCTC
CCTGTTGTTT TATCTAACAT TTTGTATCTA AAGGTTTTGA TTATTATTTT TATATTATCC
ATCCTTGCAA TATTGGCTAT TTTTAATGTA GTGAATATCA ATCAAAAAAC ACTACTCACT
ATTGGGCTAC TCTCTATTAT CACCACCTTA TATGCGCCAA GAATGATAAT TAAAAATGCA
CTCACTAAAA GAACAAATAC TTTATTGAAA TCTTTACCTT TCTTTATTGA TATTACAGCG
GCATGCGTTC AATCTGGCAT GACAATAGAG AATTCATTAA ATTATACCAC ACAAAAATTC
CAAACAATAA ATACCGACCT ATGCTTGATT ATGTCAAAAG TGACCAAGCG TGCTGAAATA
AATGGTTTAG AAAATGCGAT TAAAGAACTT CAATATTACT CACCAGCAAT AGAAATGAAA
ATGTTTTGCA GCACACTGCA ATACAGTCTT AGTTTTGGCT CAACGGTGTA CGAACAACTG
ACTCACTTAT CACAAGATAT GAGAGAAATG CAGCTACTGA TGACAGAAGA GAGCATCAGT
AAATTATCCA CAAAACTGAC ACTGCCATTA TTTTTATTTA TTTTGATCCC TTTCGTCTTA
TTGGTTATCT CACCGAGTAT TCTGGAGCTA CTTAACTATG TTAAAAATAT TTAA
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| Protein sequence | MRIIFFTLLI LFGLIIILKV NSRSRRISIY NKINSRENKS KETNNDTKDK PTVLSDFIKL
PVVLSNILYL KVLIIIFILS ILAILAIFNV VNINQKTLLT IGLLSIITTL YAPRMIIKNA
LTKRTNTLLK SLPFFIDITA ACVQSGMTIE NSLNYTTQKF QTINTDLCLI MSKVTKRAEI
NGLENAIKEL QYYSPAIEMK MFCSTLQYSL SFGSTVYEQL THLSQDMREM QLLMTEESIS
KLSTKLTLPL FLFILIPFVL LVISPSILEL LNYVKNI
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