Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0660 |
Symbol | |
ID | 6088183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 720697 |
End bp | 721608 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595723 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001719416 |
Protein GI | 170022911 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.441654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCA CGTTGGAAGA GTTGCAGGCA TTTACCTCGG TAGTGGACTG CGGCTCTATC ACGGCTGCGG CAGAGCAGCG CAGCCAAACG ACATCGGGGA TTAGCCGGGC ATTGAGTCGG CTAGAGCAGA AGCTGGCGAC AACGTTGCTA CGCCGTACGA CTCGGCGTCT GGCGCTGACA GAAGAGGGGG CGCTGTTCCT CAGTCATGCG CGGCAGATTA TCGGCGCAGT CGATGATGCT GAAGAGCAAA TTGCCCTGAG GCGGTTGAAG CCTGCTGGCC GGTTACGAGT TAATGCGGCA GCTCCTTTTA TGCAACATGT CATTGTGCCG ATGATCACCG GTTTCCGTGC GTTGTATCCG CAAATCACGT TGGAATTGAA TACCGACGAT CTCAATATCG ATCTGCTTGA GCAGCGCACT GACATTGCTA TCCGTATCGG TGCGTTGAGG GATTCGACGA TCCATGCCCG GCTGCTTGGT GCCAGCCGGG TGCGTCTGCT TGCCAGCCCT AACTACCTAC AACGTCACGG TACGCCTCAC ACCATTGAGG CACTGGCAGA TCACAGCCTG CTGGGCTTTA CTCAGCCCGA ATTTCTTAAT CAGTGGTCAT TACCCCATTT ACCCGGCGGG CGTTCGTCAA TTATCCCCAA CTTGGCGGCT TCCAGCGGTG AGACTCTGCG TTTACTGGCT TTACAGGGCG AAGGGATTGC CGAACTCTCT GATTTCATGA CCCGCGAGGA TCAATTAGCC GGGCGCTTAG TCGAGGTTCT GGCTGATCAA ATTCTAGAGA CTTGGCAACC GATCAACGCC GTTTATTACC GTAATACTCA GCTTGCTGCG CGCATTACCT GTTTTCTTGA TTATGTTAGT GAACAGATTA AGTTACAGGG GAGTCACTGG CTAAGAATAT AA
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Protein sequence | MKVTLEELQA FTSVVDCGSI TAAAEQRSQT TSGISRALSR LEQKLATTLL RRTTRRLALT EEGALFLSHA RQIIGAVDDA EEQIALRRLK PAGRLRVNAA APFMQHVIVP MITGFRALYP QITLELNTDD LNIDLLEQRT DIAIRIGALR DSTIHARLLG ASRVRLLASP NYLQRHGTPH TIEALADHSL LGFTQPEFLN QWSLPHLPGG RSSIIPNLAA SSGETLRLLA LQGEGIAELS DFMTREDQLA GRLVEVLADQ ILETWQPINA VYYRNTQLAA RITCFLDYVS EQIKLQGSHW LRI
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