Gene YPK_0613 details

Gene Information

• Locus tag: YPK_0613
• ID: 6091185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 675604
• End bp: 676206
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641595675
• Product: putative phage terminase, small subunit
• Protein accession: YP_001719369
• Protein GI: 170022864
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3728] Phage terminase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTTA CAGAAGAACA GAAGGCGCTT TTCGATGCCC TGACGCAATT ACAGCGCAGA 
TTCGTTACCG CGCTGCTAGA GGGTGCCAAT CAAACCGAGG CATACCGAAG GGCTGGCGGT 
AAAGCTAAAG GCGATGGTGA GCGTTCCAAA GCCAGCCAGT TAGTAACAAA TAGTAACGTT 
CAAGCCTTCC TCCAGTCCGT ACAGCACGAA ACAGTTAACG CGGCCATCAT GACCTACACG 
GAAGCGATGG AACGACTAAC ATTGATGGGG CGCACGACAA TTCATGACAT CGCCACGTTT 
GGCAATTATC AGATTGGTGA AGACGAGGAC GGGCAACCGG TCTTTCAGGC GTCATGGAAG 
TTGAAGGACT CCAAAGATAT TAAGCCCGAA CACCTGGCCG CTGTCGCTGA ATTATCCACT 
GGCAAGGATG GGCTAAAAAT TAAGCTGCAT GATCCGAAAG CTGCCATCAA GCAACTGGCT 
GAAATGTGTG GATGGGAAGC ACCGAAGAAA GCCGAATTGA CCGGCGCGAA CGGTGGCCCG 
ATCCAAACGT CAAACCTAAC CCCTGATGAA GCCGCAGAGG CCTACCGTAA AATGATGGGA 
TGA 

 

Protein sequence

MTLTEEQKAL FDALTQLQRR FVTALLEGAN QTEAYRRAGG KAKGDGERSK ASQLVTNSNV 
QAFLQSVQHE TVNAAIMTYT EAMERLTLMG RTTIHDIATF GNYQIGEDED GQPVFQASWK 
LKDSKDIKPE HLAAVAELST GKDGLKIKLH DPKAAIKQLA EMCGWEAPKK AELTGANGGP 
IQTSNLTPDE AAEAYRKMMG