12 homologs were found in PanDaTox collection
for query gene YPK_0613 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_0613  putative phage terminase, small subunit  100 
 
 		 200 aa  414  9.999999999999999e-116  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_3746  putative phage terminase, small subunit  97 
 
 		 200 aa  404  1.0000000000000001e-112  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_0046  putative phage terminase, small subunit  96.5 
 
 		 200 aa  402  1e-111  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_0552  hypothetical protein  100 
 
 		 112 aa  237  6.999999999999999e-62  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0175758  n/a   
 
 
-
 
NC_010002  Daci_4100  terminase small subunit  31.43 
 
 		 210 aa  73.2  0.000000000003  Delftia acidovorans SPH-1  Bacteria  normal  1  hitchhiker  0.00000000879994 
 
 
-
 
NC_010505  Mrad2831_4154  hypothetical protein  29.8 
 
 		 200 aa  67  0.0000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.873054  normal  1 
 
 
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NC_010465  YPK_1220  terminase small subunit  31.38 
 
 		 183 aa  65.1  0.0000000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_010465  YPK_2803  hypothetical protein  96.67 
 
 		 30 aa  59.7  0.00000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_009012  Cthe_2473  terminase small subunit  33.7 
 
 		 149 aa  51.6  0.000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
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NC_009436  Ent638_0799  hypothetical protein  39.77 
 
 		 157 aa  47  0.0002  Enterobacter sp. 638  Bacteria  normal  0.656983  normal  0.0124917 
 
 
-
 
NC_008044  TM1040_0800  terminase small subunit  26.92 
 
 		 192 aa  46.2  0.0003  Ruegeria sp. TM1040  Bacteria  normal  1  hitchhiker  0.00000604 
 
 
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NC_009972  Haur_0565  terminase small subunit  28.35 
 
 		 233 aa  42.4  0.005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
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