Gene YPK_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0565 
Symbol 
ID6089066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp622245 
End bp623744 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content49% 
IMG OID641595627 
Productputative kinase protein 
Protein accessionYP_001719321 
Protein GI170022816 
COG category[R] General function prediction only 
COG ID[COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA TTGTTACCTG TACGACAAAA GATGGCGAAA CCATCCAGTA CGTTGACGAG 
ATCATCGGCT CGGGCTCAAT GAAGGATGTG TACTTCTCTC CCGATAAATC TTATGTCGTG
GCCTTTTATA AAAAACCACA GAATGATCAG GCGAAAGAGC GCATCGATAT GATCACCGGT
CGCTACCGGC AGAATATTTT CGAGCAGTCC GGTGGGGAGT ACTGGAAAGA TTTATTTTGC
TGGCCCACCC ATGTCGTTGA GCATAATGGA AAAATTGGGA TTGTGGTGCC CACCTACCAA
AATCATTTTT TCTTTAAGTA CGGTTCTAAA AACAATGATT TTCTTGGCAT AAAAGGCCGA
GAGAAAGAAG GTAAATGGTT CGCCAGCGCC AATAATCAGA ATAAATTTCT GGATCCACGC
GAGCGCGGCA ATATTCTGAA CTACCTCAAG GTGTGCCTAC TGCTGACGAG AGCCGTCAGG
CGGATGCATG CAGCGGGTCT ATGCCATAGC GATCTGAGTT ACAAAAACGT TCTCATCGAT
CCAGAGCAGG GGCATGCCTG TATCATTGAT GTTGACGGGC TGGTGGTACC GGGCAAATTC
CCTCCTGACG TGGTAGGAAC GCCCGATTTT ATTGCACCAG AGGTGGTGAA AACCAGCCAT
CTGCTGAAAG AAGATCCCCA ACGGATTTTA CCGAACATAA CAACTGACCG ACATGCGCTC
TCGGTGCTTA TCTACATGTA CCTGTTTTAC CGTCACCCGC TTCGGGGCGG AAAAATACAT
GACATGGATG ATGAAGTCCG TGACGAGTCA CTGGCTATGG GGGAAAGAGC GCTTTTTATC
GAGCATCCAA CCGACCGCAG TAATGCCGTT AAACTCAATC AAGTGAAGCC GTCCTCTCTT
CCTTGGGCGG ATCCGCAGAA AGTCCCCTAC ACCATTATGG GCCCCTATCT GACACAGTTG
TTTGAGAAAG CATTCATCGA TGGCCTGCAT GACCCATCCA AACGCCCGAC TGCTGATGAA
TGGGAAACCG CCTTGGTTAA AACGGTTGAC CTCATCCAGC CGTGTCAAAA CACCGCTTGT
GAACAGAAGT GGTACGTCTT CTCAGGGAAA ACCAAGCCGG TTTGCCCGTA TTGCGGAACC
GCTTTTAAGG GAAAACTGCC CATTCTGAAT TTGTACTCAT CACGAAAAGC AGGCAGTTAC
CGGCCCGATG ATCATCGCCT GATGGTCTGG AATGGTCAGT CGCTTTATGC GTGGCACGTT
AACCGGCTCA TTGCGCCGAA CGAACGCACA TCCGAAGCGC AAAAAAAACG GGTAGGCTAT
TTTGTTTTCC ATAACGATCA ATGGTGGCTG GTCAATGAAG GGATTACTGG GTTGATGTCA
CTACCCGATA AAAAAGCCAT CGGCATTGGG GAGAAATTGG CGCTCACTGA TGGTGCGCAG
TTAGTCCTCT CCACAGAAGA GGGTGGGCGG TTGGTGGTGG TTCAGCTTGT CGCTAATTGA
 
Protein sequence
MANIVTCTTK DGETIQYVDE IIGSGSMKDV YFSPDKSYVV AFYKKPQNDQ AKERIDMITG 
RYRQNIFEQS GGEYWKDLFC WPTHVVEHNG KIGIVVPTYQ NHFFFKYGSK NNDFLGIKGR
EKEGKWFASA NNQNKFLDPR ERGNILNYLK VCLLLTRAVR RMHAAGLCHS DLSYKNVLID
PEQGHACIID VDGLVVPGKF PPDVVGTPDF IAPEVVKTSH LLKEDPQRIL PNITTDRHAL
SVLIYMYLFY RHPLRGGKIH DMDDEVRDES LAMGERALFI EHPTDRSNAV KLNQVKPSSL
PWADPQKVPY TIMGPYLTQL FEKAFIDGLH DPSKRPTADE WETALVKTVD LIQPCQNTAC
EQKWYVFSGK TKPVCPYCGT AFKGKLPILN LYSSRKAGSY RPDDHRLMVW NGQSLYAWHV
NRLIAPNERT SEAQKKRVGY FVFHNDQWWL VNEGITGLMS LPDKKAIGIG EKLALTDGAQ
LVLSTEEGGR LVVVQLVAN