| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0553 |
|---|
| Symbol | |
|---|
| ID | 6087767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 603190 |
|---|
| End bp | 604494 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641595615 |
|---|
| Product | d-galactonate transporter |
|---|
| Protein accession | YP_001719309 |
|---|
| Protein GI | 170022804 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.351291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTA AAATTAAAGG GTTACGCTGG TACATGATCG CATTGGTCAC CGTCGGTACC
ATATTAGGTT ACTTAACACG TAATGCCATT GCTGTTGCCG CGCCGACACT GCAAGAACAG
TTACATATTA CCACCCAGCA ATATTCTTAT ATTATCGCTG CCTATTCAGC CGCTTATACC
CTAATGCAAC CAGTAGCCGG TTATGTATTG GACGTTATGG GTACCAAAGT GGGCTATGCC
ATGTTTGCCG TTATGTGGGC CATATTTTGT ATGAGTACCG CCTTGGCCAG CAGTTGGGGT
GGATTAGCTA TCGCCCGTGG TGCGGTAGGT ATGGCAGAGG CGGCTATGAT CCCTGCAGGC
CTGAAAGCCA GTAGTGAATG GTTCCCGGCC AAAGAGCGTT CTATTGCGGT AGGCTACTTT
AACGTTGGCT CCTCCATCGG CGGTATGATT GCTCCCCCTC TCGTGGTCTG GGCTATCGTG
ATGCACAGTT GGCAGATGGC GTTCATCATT ACCGGTGTAC TCAGCCTGAT TTGGGCCATT
GCCTGGTTAA TCCTCTACAA ACACCCGAAA GATCAAAAAA GACTCAGCGA CGAAGAACGT
GAGTACATCC TTAGCGGCCA AGAAGCACAG CACTCCACTG CTAATGCCAA AAAGATGTCT
GCGATGCAGA TTATCCGCAA CCGTCAATTC TGGGGTATTG CCATCCCGCG TTTCTTGGCA
GAACCCGCTT GGGGGACGTT CAACGCGTGG ATTCCGCTCT TCATGTTTAA AGCTTATGGC
TTTAACTTGA AAGAGATAGC CATGTTTGCC TGGATGCCAA TGCTGTTTGC TGATGTAGGC
TGCATTCTGG GTGGCTACCT GCCGCCACTG TTCCAAAAAT ACTTTAAGGT TAACCTGATT
GTTTCCCGTA AGTTAGTCGT CACTATGGGT GGGGTATTGA TGATTGGGCC TGGGACCATC
GGCCTATTCA CCAGCCCTTA TGCGGCTATC GCGCTGCTCT GTATCGGGGG CTTTGCTCAC
CAAGCACTGT CAGGAGCACT GATTACATTA TCTTCTGACG TTTTTGGCCG TAACGAAGTC
GCAACCGCCA ACGGCCTGAC GGGGATGGCG GCCTGGACGG CCAGTACTCT GTTCGCCCTC
GTGGTAGGGG CACTAGCCGA TACCATGGGC TTCAGCCCAC TGTTTGCTGC ACTGGCGGTA
TTTGATTTAC TGGCCGTCGT GGTTATCTGG ACCGTGTTAC AAGATCGCAC AGCAGATGAA
CCAACGAACG ACCCGGTTCA ACGGCCGCCG GTTGGACAAA ACTGA
|
|---|
| Protein sequence | MMRKIKGLRW YMIALVTVGT ILGYLTRNAI AVAAPTLQEQ LHITTQQYSY IIAAYSAAYT
LMQPVAGYVL DVMGTKVGYA MFAVMWAIFC MSTALASSWG GLAIARGAVG MAEAAMIPAG
LKASSEWFPA KERSIAVGYF NVGSSIGGMI APPLVVWAIV MHSWQMAFII TGVLSLIWAI
AWLILYKHPK DQKRLSDEER EYILSGQEAQ HSTANAKKMS AMQIIRNRQF WGIAIPRFLA
EPAWGTFNAW IPLFMFKAYG FNLKEIAMFA WMPMLFADVG CILGGYLPPL FQKYFKVNLI
VSRKLVVTMG GVLMIGPGTI GLFTSPYAAI ALLCIGGFAH QALSGALITL SSDVFGRNEV
ATANGLTGMA AWTASTLFAL VVGALADTMG FSPLFAALAV FDLLAVVVIW TVLQDRTADE
PTNDPVQRPP VGQN
|
|---|
| |