| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0479 |
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| Symbol | |
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| ID | 6087129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 527175 |
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| End bp | 530768 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641595541 |
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| Product | toxin subunit |
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| Protein accession | YP_001719235 |
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| Protein GI | 170022730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACTA GCACTGTATT AAATAAAATT AACGAATCGC GCCGCGACGC ATTGGTTAAC
TACTATCTTG CTAAAAATGT CAGCGGTGAC GAGAAAATTA AAACTGCAGA ACAACTGTAT
CAATATTTAT TGTTAGACAC TAAAATTGGC CATGAAGTAA AAACCTCATC TATTGCCGAA
GCGATCAGTA GCCTACAAAT TTATATTAAT CGCTGTGTTG ATGGAGAAGA AAATGATCTC
CATGAAAAAA ACATCAGTAC ACATTTCAGT AGCGATAACT TTCTGCATGG CTGGAACAGT
TATAATAAAC GCTATGCGCG CTGGGCGGGT AAAGAGAAGT TAATGTATTA TGCGGCAGAC
TATATTGACC CTACATTGCG CTATAATAAA ACTGAGCTAT TTAATACTTT TGAACAAAGT
ATCAACAACA GCAGACTGAC GGAAAAATCA GTCAAATCAG CATTGCAAAG CTATTTAATC
AGCTATGAAA AACTGGCTCA AATAGATACT ATCAAAGAGT TGTATGTAGA AAACATTAAG
ACTCATTTTT TCCTCGGTAA AACCCGTGAA TCACCTTGCC AATATTATTG GCGTAGTGGT
GAACAATTGT CTAATGATAG CCATCATCTA CGCTGGTCTG AATGGAAAAA AGTCAATTGC
AATATCAATG GTACAGAAGA AAAATTCTTT ATCAATCTTA GTTGGCATCG AAGTAGTCTT
TATATTGATT GGATTAATAA ATTCTCCATT AGGACCGATA AAGATGAAAC CACAGAGAAA
TATCATTACA ATCGTGTATA CAAAAACGAT GATAACACTT GGTCAGAACT CATTATCAAT
ATGGATATAG GATTTAAGTT GAGCACCTCA ACCGAGGTTA TAACATTGCC TCCTTTCTTT
GTAAATCAAG GTAATCAAAA CGCTAAAGAA GAAGTTGAAA ATTTATTTTT AACTAATGGA
ACCAGCATAA AAAAAATAGA GTCACGCATT CATGGTTATA TTAAAGGTCA TATTAAAGTA
TTGTGCAATG ACGATGGCAT ATCGTTTGAA ATAGCGGAAA AACTTATCAA TGGAGATAAT
GGCACCATCG GTGACATTAA AATAGTTGAA AATGGAAAGA ATATATTAGT TATAAACAAT
GAAAAGGGAG AAAATAAAAA AATAAATCTT ATAGATAAAT TTGAAATTAA AATATTTCCA
TATAATGAAT TGGTAGCCAG TACTATTGCA TTCAATAGAA TAAAGCCTGA AGAAAAAATA
ATCGATGAAT TAGACGATAA AATCTCTTTA CTATCACCGA ATAGCCTGCC ATTAAAAGAA
AAATTTCAAA CATCAGTTGA TGAGTTACTC AGTTATAATA CCCAAAAAAA TAACGTTAAA
TTAGATGCAT TCAATGGGTC TTACGGTATT TATTTATGGG AGTTATTCTT TCACATTCCG
TTACTGGCGT CTATGCGGTT CCTAAATGAA CAACGCTTTG ATCTGGCGAA GCACTGGTTA
AAATATCTGT TTAATAGTGC CGGTTATCGT GATGGGAATG GCAACTTGCT AAAGGAAGGC
GATAATATCC TTTATTGGAA TAGCCTGCCA CTGCAACAAG ATACCGCTTG GGATAACAAT
ACGCTAATAC AGGCAACCGA CGACCCGGAT GTTATTGCCA TGCAAGATCC GATGCAATAT
AAGCTGGCGA TCTTTATGCG TACCTTAGAC TTGATTATTA GCCAAGGCGA TCAAGCTTAT
CGTCAATTAG AACGGGATAC GCTGGCCGAA GCTAAAATAC ACTATATTCA GGCCAGTCAA
TTATTAGGGC CACGCCCAAA CCTTAATCGT GGTCATCAGT GGGAAGACAT CAAATTAGCA
GAAGAAAGTC GCCAATTGGA GAATAGTCAT TTCCTGCCAC CCTATAATGA ACTGTTATTA
TCCTATTGGG ATAAACTGGA AATTCGCTTA TATAACCTGC GCCATAACCT GAACTTGGAT
GGTCAACCAT TACATTTACC CCTCTTTGCT ACACCGGTTG ATCCTAAAGC ATTGCAGCGT
CAACACGGGG CCGGTAATGG CATCATTAGT AGTGAGCAAA TGGCAACAGC GCAAACCTCG
CTGTATCGCT TTCCACTGTT AATTGAACGA GCAAAAAGTG CCGTCAGTTC GGTGATTCAG
TTCGGCAACA GCCTGCAAAG CGTGCTGGAG AGGCAGGATA ACGAAGCCAT GACGTTATTG
TTCCAACAAC AGCAACAGAA AGTTTTGCAG CACACTAAAG ATATTCAAAA CAATAATATC
CAAGTCTTGC AAGCCAGCCT AGAAGCGACA GATTCACTCA AAAGTGCTGC AGAACAACGG
CGTAAGCATT ATAAGGAGCT GCTGGATAAC GGTATTTCCA GCGATGAGCA ATTAGCGATT
AATATCCGTA TTGCCTCTGC GGCCCTCAAT GCTGAGTCTC TCGTCCCCTT GGGGCTTAGT
GCTGTTTTGG ATACTGCGCC CAATGTTTTT GGCTTGGCTG ACGGGGGTTC TCGCTGGGGG
GCGATATCAC AGGCGGTTGG CTGGGGAATG CAGAGTCTGG CTCTCGGCCT GGAAACCACC
GCGGGTGTTC GTGATGCAAA AGCCAATTAT AGCCGTCGCG CACAAGAGTG GACCTTGCAA
AAAAATCAGG CGGATAAAGA TATTGAACAG TTAGCGCACC AATATACCAG TGTGCGGGAA
CAGCTCAATA TGGCGCAAAA ACAGCTGAAT TTAGCTGAGT TAGAGCAAGG CCATGCCGAC
GCTCTGTATC AGATGCAAAG CAGCCGTTTT ACCGGCAAAG AGTTATACAA CTGGATGGCA
GGTCGCCTTT CGGGCCTCTA TTTCCAACTG TTTGATGCCA CTCAACCCCT GTGTTTAATG
GCAAAGGCGG TACTGGAAAA AGAGGTCGAT AAAGCGAAAA CCGATGGCTT ATTTATCCGC
TCCGGTTGGA ACGATCTCTA TCAAGGACTA CTGGCGGGTG AAGACCTGCA ACTCAATCTG
CAAAAATTGG AAAATGTGTG GCTGATGGAA GAACAGCGGG CGCTGGAAGT AGAGCGTACC
GTTTCATTGG CACAACATTA TCAACAGCTA AGCGACCATA AGTTCAATCT GGCAGAAATC
GTTACGGGCT ATATGGCGCA AGATAAAGAC CAAAAAACCG GTAATGAACA AGACTTTGTT
GAATTAAAAA ATAGCACCTT AATTACCTCC CTCAGCATCA AGGGCCTGAA CCTGGTTGAG
GACTATCCGG AAACCATGCA TTTGGGTGAT ATCCGCCGCA TCAAGCAGAT AAGCGTGAGT
TTACCGGCGC TGTTAGGGCC GTATCAGGAT GTTCAAGCCA CTCTCGATTA TGCGGGTGAA
AATACCCATC TGGCAAAAGG GTGTACCGCG CTGGCAATCT CCCGCGGAAT GAACGATAGC
GGCCAGTTCC TACTGGACTT TAACGACGGT AAATATCTGC CGTTTGAAGG AATTGATATC
AGCGACAAGG GCACATTGGT GCTGCGCTTC CCTAATGCAA CTAGCAAACA AAAACTGCTG
CTGCAAAGCC TGAGCGACAT CATTTTGCAT ATTCGCTACA CCATCCGTTC CTGA
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| Protein sequence | MPTSTVLNKI NESRRDALVN YYLAKNVSGD EKIKTAEQLY QYLLLDTKIG HEVKTSSIAE
AISSLQIYIN RCVDGEENDL HEKNISTHFS SDNFLHGWNS YNKRYARWAG KEKLMYYAAD
YIDPTLRYNK TELFNTFEQS INNSRLTEKS VKSALQSYLI SYEKLAQIDT IKELYVENIK
THFFLGKTRE SPCQYYWRSG EQLSNDSHHL RWSEWKKVNC NINGTEEKFF INLSWHRSSL
YIDWINKFSI RTDKDETTEK YHYNRVYKND DNTWSELIIN MDIGFKLSTS TEVITLPPFF
VNQGNQNAKE EVENLFLTNG TSIKKIESRI HGYIKGHIKV LCNDDGISFE IAEKLINGDN
GTIGDIKIVE NGKNILVINN EKGENKKINL IDKFEIKIFP YNELVASTIA FNRIKPEEKI
IDELDDKISL LSPNSLPLKE KFQTSVDELL SYNTQKNNVK LDAFNGSYGI YLWELFFHIP
LLASMRFLNE QRFDLAKHWL KYLFNSAGYR DGNGNLLKEG DNILYWNSLP LQQDTAWDNN
TLIQATDDPD VIAMQDPMQY KLAIFMRTLD LIISQGDQAY RQLERDTLAE AKIHYIQASQ
LLGPRPNLNR GHQWEDIKLA EESRQLENSH FLPPYNELLL SYWDKLEIRL YNLRHNLNLD
GQPLHLPLFA TPVDPKALQR QHGAGNGIIS SEQMATAQTS LYRFPLLIER AKSAVSSVIQ
FGNSLQSVLE RQDNEAMTLL FQQQQQKVLQ HTKDIQNNNI QVLQASLEAT DSLKSAAEQR
RKHYKELLDN GISSDEQLAI NIRIASAALN AESLVPLGLS AVLDTAPNVF GLADGGSRWG
AISQAVGWGM QSLALGLETT AGVRDAKANY SRRAQEWTLQ KNQADKDIEQ LAHQYTSVRE
QLNMAQKQLN LAELEQGHAD ALYQMQSSRF TGKELYNWMA GRLSGLYFQL FDATQPLCLM
AKAVLEKEVD KAKTDGLFIR SGWNDLYQGL LAGEDLQLNL QKLENVWLME EQRALEVERT
VSLAQHYQQL SDHKFNLAEI VTGYMAQDKD QKTGNEQDFV ELKNSTLITS LSIKGLNLVE
DYPETMHLGD IRRIKQISVS LPALLGPYQD VQATLDYAGE NTHLAKGCTA LAISRGMNDS
GQFLLDFNDG KYLPFEGIDI SDKGTLVLRF PNATSKQKLL LQSLSDIILH IRYTIRS
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