Gene YPK_0216 details

Gene Information

• Locus tag: YPK_0216
• ID: 6087868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 252995
• End bp: 255049
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641595276
• Product: transposase
• Protein accession: YP_001718982
• Protein GI: 170022477

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.687091
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCTTT CTGTGAATGA GCTGATTGGG TTACCGGGTA TGCCTGGGAC TGCTCCGGGT 
ATTAGGGCTG CGCTTAACAA GCGCGCGGGT AGTTCACTGG AATTGAAACG TAAACGCGCT 
GGTACCAAGG CATTTGAATA CCATATTGAT TGCCTCACAG AGCAGCAACA AAACGTTGTT 
CGTGAGCGCC ACCTTAACTC TCTTTTAAAT GCAGAGAAAA AAGCCGTTAA AACGGCATTT 
AACGGCGATT TAAACCCAAG GGTAAAAGCC AAGCATGAAT TAGACCTTAT GCGCCAATGT 
CCCGCCCTGT TGGAACGCAG CACCGGGAGT CTGACCAAGT TACAGCGTGA TATCGCGGAT 
GCTCGCGCCA CTTTGGTGAC CGAGGTTATC AATTTACAGA ACGCCGGATT GTCCCGCATT 
CGGGCCATTA ATTATATTTG TGACCAGTCA CGTTCTAATA ATTTGCCTGA GAACTTGCAG 
AAAGCAGCCG CGATGGCCAA TGCCCGTAAA GGTCTGCGCA CAGGCGTCAG TACCCGCACC 
CTGAATGGTT GGGTTGTTGA CTATGAACGT GCCGCCACGC CCTCTGAGCG TCTGGTTTTA 
TTGGCTCCAG GGCACAATAA AGGCAAACCC GTTGAGCGCA TTAAATGGAT GCCACTATTT 
ATGGCGCACT ACCGCACCAC CAACGGATTA AGCATTGCTG AGGCTTACGA GAACTTTGAG 
CATGACTGGC AAATGCAGTA TGCAGACCAG CCCGCCATGC TCGCCGCAAT TCCTTCTGTC 
TATGCCGTGC GGCGGGCATT AGACAAGTTG CCAACCGTCG TTAAACAACG TGGCCGTGTT 
ACGGGTTCTG CCATGCGAGC GCTGAATACT TATGTGAAGC GTGACTGGTC ACAAATGCCC 
GTTAATGGCG TTTGGATTGG GGATGGCCAC AGTATGAAAA TGAAGGTGGC ACACCCTGAC 
CATGGTCGTC CATTTACCCC CGAAATCACG CTGGTTATTG ATGGCCGGAC ACGCTATGTC 
GTCGGCTGGA GCCTGAGCCT GGCTGAGAAC GTGATCGCTG TGGCTGATGC ACTGCGCCAC 
GGTATGCAGA GTCACGGCAT ACCCCTGATT TACTATTCAG ATAACGGTGC AGGTCAAACC 
GCAAACGTAT TAGATGCTGA TATTACGGGG ATTTTATCGC GTCTTGGTGT GGAACACCCC 
ACCGGTATCC CCGGTAACCC GCAGGCACGT GGGATTATTG AGCGGCTTAA CCGCGAAATT 
CCTGCCCGTA TCGCCCGTAA ATTTGCCACC TATAACGGTA AATCTGCTGA CCGCGAAACG 
GTTCGTATGG TCAGCGTTGA CCTTAATTCA GCCTTCAATG CACAGGGGAA GAATAAAGAG 
CTCAGCAGTC GCCAAAAGGC GGCGATGGCT AAATTACCCT CATGGCAGCA GCTTATCGAT 
GCCATAGAAG ATGAAATTGA AGCCTATAAC ACCACTCACC GTCACAGTGA ATTACCCCGC 
CGTGACGATG GTAAACACTA TACCGCTACG GAGTACCGCC AGTTATTGCT GGCCAGCGAG 
ACCATTGATC GCCTTTCCGA TATCGAGTTG CGCGACATGT TCCGTCCGCA AGTCAAACGT 
ACCGCCCAGC GCGGTTGGCT GTCTATCTTC AATAACCAAT ATTTTGCTGA GGGTTTAATT 
CAGGTCGATG GCGAAGAAGT TCTGGTTGAG TTCGATATTC ACGATGCCAG CAGCGTTACC 
GTTCGCCGCC TTGATGGCTC GTTTATCTGT ACTGCGATTG TGAATGGTAA TACCCGCGCC 
GCCTTCCCTG TCGATTACGT CCAGAAAGTG GCAAAAGACC GCCATAGCCG CCGTATGAAA 
CTGGTTGAAC AAAAAGCCGA AGAGATTAAT GCCGAGCTTA ATCCAGTATT AACCGTTGAT 
AGTGCGCCTG ACTTTGGCTC ACTGATTCAG GGTGATATCT CACGCATTAA TGATGACCGG 
GAAGAGATGT TTTTATTCCA ATCTGATCGC GATGAATATT TAAAAACACA CGGTAATAAA 
AAAGCGGCGA TTTGA 

 

Protein sequence

MFLSVNELIG LPGMPGTAPG IRAALNKRAG SSLELKRKRA GTKAFEYHID CLTEQQQNVV 
RERHLNSLLN AEKKAVKTAF NGDLNPRVKA KHELDLMRQC PALLERSTGS LTKLQRDIAD 
ARATLVTEVI NLQNAGLSRI RAINYICDQS RSNNLPENLQ KAAAMANARK GLRTGVSTRT 
LNGWVVDYER AATPSERLVL LAPGHNKGKP VERIKWMPLF MAHYRTTNGL SIAEAYENFE 
HDWQMQYADQ PAMLAAIPSV YAVRRALDKL PTVVKQRGRV TGSAMRALNT YVKRDWSQMP 
VNGVWIGDGH SMKMKVAHPD HGRPFTPEIT LVIDGRTRYV VGWSLSLAEN VIAVADALRH 
GMQSHGIPLI YYSDNGAGQT ANVLDADITG ILSRLGVEHP TGIPGNPQAR GIIERLNREI 
PARIARKFAT YNGKSADRET VRMVSVDLNS AFNAQGKNKE LSSRQKAAMA KLPSWQQLID 
AIEDEIEAYN TTHRHSELPR RDDGKHYTAT EYRQLLLASE TIDRLSDIEL RDMFRPQVKR 
TAQRGWLSIF NNQYFAEGLI QVDGEEVLVE FDIHDASSVT VRRLDGSFIC TAIVNGNTRA 
AFPVDYVQKV AKDRHSRRMK LVEQKAEEIN AELNPVLTVD SAPDFGSLIQ GDISRINDDR 
EEMFLFQSDR DEYLKTHGNK KAAI