Gene YPK_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0202 
Symbol 
ID6090232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp247066 
End bp247467 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID641595262 
Producthypothetical protein 
Protein accessionYP_001718968 
Protein GI170022463 
COG category[S] Function unknown 
COG ID[COG4382] Mu-like prophage protein gp16 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA AACTAATCCA GCTTATTCAT GTGGGTAAGT CTGCTTTAGC CTGGGACGAT 
GAAACCTACC GTGATGTTAT TTATCGCCTG ACCGGTAAAA CCAGCTCTGC CAAGTGTTCT
ATTGAGCAGC AAGAACGTAT TGTAGCTTAT ATGCGGGCTC ATGGATTTGA GCCTAAACCC
GCCCCAACAC GGGGACGTAG GCCCAGCGTT CCGGCCAGTA AGAAGACGAT ACTCAGTAAG
ATTGAGGCGC TTCTGACTGA CGCCAACCGT CCATGGAGTT ATGCTGAATC TATGGCGCAA
CATATGTTTC AGGTAAGATA TGTTGATTGG TTGCCGCTGG ATAAGCTGAC AAAACTGATG
CAGGCATTGA TTATTGATGC AAAACGTCGA GGGAAACCAT GA
 
Protein sequence
MDKKLIQLIH VGKSALAWDD ETYRDVIYRL TGKTSSAKCS IEQQERIVAY MRAHGFEPKP 
APTRGRRPSV PASKKTILSK IEALLTDANR PWSYAESMAQ HMFQVRYVDW LPLDKLTKLM
QALIIDAKRR GKP