Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0183 |
Symbol | |
ID | 6091247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 234521 |
End bp | 235747 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641595243 |
Product | tail fiber repeat 2-containing protein |
Protein accession | YP_001718949 |
Protein GI | 170022444 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA TCATGCCGCC AATTAATACC CCTGACAATG CATTTCATGA CGGTAACCCG GCAACGGGTG AGCAAGGCAC GATTGTTCCA GGCGCGTGGT TGAATAACGT GCAAAGCGGT GTTATTAGCA TTCAACAAGA ATTATTGTCT GTATTAACGA AAGCCGGAAT AGAAATAGAT GAAACAAAGC AAGACCAATT AGTTACTGCT ATAACAAAAT TAATAACCCA GGGCATCCCT GAACTACCCT CTGCATCATT AGCCCAAAAA GGTATCGTGC AATTAAGTAG CGCGACAAAC AGTGACAGTG AAACGCTAGC TGCAACATCA AAAGCTGTTA AAACGGCAAA TGACGCCGCC CTGAAAATCG TGAATAACTT ATCTGAAATA GCCGCAGCGG GACCGGGCGC TGTACTTGCT GCAATCACAA ATCTGAATTT ATTGACGACA GTAAATAGAG CTAACGGATC ATTGCAATCT GCAAGCAATT TATCAGAGAT AAATTTATCA GGACCTGCCG CTATGGCCGC GGCTGTTGCC AATCTTGGAT TAACTGAAGC CGCTGCTGCT GTTGCTAATG CATTGAAGAA AAGTGCAAAT CTGTCTGATG TAGCCAACCC TGCCGCAGCT TTGAAAAACA TCGGTGGATT TGCTGTTAGA GGGCCTCTTG ATTCAAAAAA TCTAAATTTA ATCGGGAATA CTGATGAAAT TGGAGTGTGG TATCAGATAA CCGACGCTGT GACTGAAAAT AATAATTATC CAGTGAGAGC CAGCGGAACC CTGCTTGTCA TGCCAAGCGC TTATGGTTGT CAGCAAGAAT ACACCTCGTA TTCCGGATTG AAGTTTGTTC GGGGGCTGAG TGCTGTATGG AGTGGCTCCG GCCCGTGGCA AGCGTGGCAG CAAATATCAG CTCAACAGCC GAAAGCAGTG ACAACAAGTG ACTATATCCG TATTCCTGAC GTGCCAGGCG GATTGATTAT TCAGTGGTTC GCTGGAAATA CATCGATGGG TGAAGCATCG ATGGGACCAT TATCATTTCC AATCGCATTC CCCTCCGCTT GTATATTTTC AAGCGTATCA ACACTCGGGA ATGGCACTGG TGCATGTGAC CAGATGTTTC AAGTCACATC AACAAACAGA AATTCTATCA CTCTGTTTTC TCAAGTCTTT GGTTCCGGTT CGGTCCCCGG TACTGCGATC CCTCTCATTT TAGTTATAGG GTATTAA
|
Protein sequence | MKNIMPPINT PDNAFHDGNP ATGEQGTIVP GAWLNNVQSG VISIQQELLS VLTKAGIEID ETKQDQLVTA ITKLITQGIP ELPSASLAQK GIVQLSSATN SDSETLAATS KAVKTANDAA LKIVNNLSEI AAAGPGAVLA AITNLNLLTT VNRANGSLQS ASNLSEINLS GPAAMAAAVA NLGLTEAAAA VANALKKSAN LSDVANPAAA LKNIGGFAVR GPLDSKNLNL IGNTDEIGVW YQITDAVTEN NNYPVRASGT LLVMPSAYGC QQEYTSYSGL KFVRGLSAVW SGSGPWQAWQ QISAQQPKAV TTSDYIRIPD VPGGLIIQWF AGNTSMGEAS MGPLSFPIAF PSACIFSSVS TLGNGTGACD QMFQVTSTNR NSITLFSQVF GSGSVPGTAI PLILVIGY
|
| |