Gene YPK_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0183 
Symbol 
ID6091247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp234521 
End bp235747 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content45% 
IMG OID641595243 
Producttail fiber repeat 2-containing protein 
Protein accessionYP_001718949 
Protein GI170022444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TCATGCCGCC AATTAATACC CCTGACAATG CATTTCATGA CGGTAACCCG 
GCAACGGGTG AGCAAGGCAC GATTGTTCCA GGCGCGTGGT TGAATAACGT GCAAAGCGGT
GTTATTAGCA TTCAACAAGA ATTATTGTCT GTATTAACGA AAGCCGGAAT AGAAATAGAT
GAAACAAAGC AAGACCAATT AGTTACTGCT ATAACAAAAT TAATAACCCA GGGCATCCCT
GAACTACCCT CTGCATCATT AGCCCAAAAA GGTATCGTGC AATTAAGTAG CGCGACAAAC
AGTGACAGTG AAACGCTAGC TGCAACATCA AAAGCTGTTA AAACGGCAAA TGACGCCGCC
CTGAAAATCG TGAATAACTT ATCTGAAATA GCCGCAGCGG GACCGGGCGC TGTACTTGCT
GCAATCACAA ATCTGAATTT ATTGACGACA GTAAATAGAG CTAACGGATC ATTGCAATCT
GCAAGCAATT TATCAGAGAT AAATTTATCA GGACCTGCCG CTATGGCCGC GGCTGTTGCC
AATCTTGGAT TAACTGAAGC CGCTGCTGCT GTTGCTAATG CATTGAAGAA AAGTGCAAAT
CTGTCTGATG TAGCCAACCC TGCCGCAGCT TTGAAAAACA TCGGTGGATT TGCTGTTAGA
GGGCCTCTTG ATTCAAAAAA TCTAAATTTA ATCGGGAATA CTGATGAAAT TGGAGTGTGG
TATCAGATAA CCGACGCTGT GACTGAAAAT AATAATTATC CAGTGAGAGC CAGCGGAACC
CTGCTTGTCA TGCCAAGCGC TTATGGTTGT CAGCAAGAAT ACACCTCGTA TTCCGGATTG
AAGTTTGTTC GGGGGCTGAG TGCTGTATGG AGTGGCTCCG GCCCGTGGCA AGCGTGGCAG
CAAATATCAG CTCAACAGCC GAAAGCAGTG ACAACAAGTG ACTATATCCG TATTCCTGAC
GTGCCAGGCG GATTGATTAT TCAGTGGTTC GCTGGAAATA CATCGATGGG TGAAGCATCG
ATGGGACCAT TATCATTTCC AATCGCATTC CCCTCCGCTT GTATATTTTC AAGCGTATCA
ACACTCGGGA ATGGCACTGG TGCATGTGAC CAGATGTTTC AAGTCACATC AACAAACAGA
AATTCTATCA CTCTGTTTTC TCAAGTCTTT GGTTCCGGTT CGGTCCCCGG TACTGCGATC
CCTCTCATTT TAGTTATAGG GTATTAA
 
Protein sequence
MKNIMPPINT PDNAFHDGNP ATGEQGTIVP GAWLNNVQSG VISIQQELLS VLTKAGIEID 
ETKQDQLVTA ITKLITQGIP ELPSASLAQK GIVQLSSATN SDSETLAATS KAVKTANDAA
LKIVNNLSEI AAAGPGAVLA AITNLNLLTT VNRANGSLQS ASNLSEINLS GPAAMAAAVA
NLGLTEAAAA VANALKKSAN LSDVANPAAA LKNIGGFAVR GPLDSKNLNL IGNTDEIGVW
YQITDAVTEN NNYPVRASGT LLVMPSAYGC QQEYTSYSGL KFVRGLSAVW SGSGPWQAWQ
QISAQQPKAV TTSDYIRIPD VPGGLIIQWF AGNTSMGEAS MGPLSFPIAF PSACIFSSVS
TLGNGTGACD QMFQVTSTNR NSITLFSQVF GSGSVPGTAI PLILVIGY